在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 9 Reference Ions Near m/z 247.1708
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000052693 Reliable 247.1705 247.1702 ~ 247.1709
MzDiff: 2.9 ppm
alpha-Amylcinnamyl acetate (BioDeep_00000035049)
Formula: C16H22O2 (246.162)
9.04 (100%) DESI
[NOVOCELL:BACKGROUND] blank
MSI_000063231 Reliable 247.1669 247.1668 ~ 247.167
MzDiff: 0.8 ppm
3-Hydroxybutyrylcarnitine (BioDeep_00000032827)
Formula: C11H21NO5 (247.142)
4.59 (100%) Mus musculus
[UBERON:0000956] cerebral cortex
MSI_000061390 Unreliable 247.1692 247.1691 ~ 247.1695
MzDiff: 1.6 ppm
3-Hydroxybutyrylcarnitine (BioDeep_00000032827)
Formula: C11H21NO5 (247.142)
2.27 (100%) Mus musculus
[UBERON:0000956] cerebral cortex
MSI_000030129 Unreliable 247.165 247.165 ~ 247.165
MzDiff: none
3-Hydroxybutyrylcarnitine (BioDeep_00000032827)
Formula: C11H21NO5 (247.142)
2.25 (100%) Macropus giganteus
[UBERON:0003027] cingulate cortex
MSI_000031568 Unreliable 247.165 247.165 ~ 247.165
MzDiff: none
3-Hydroxybutyrylcarnitine (BioDeep_00000032827)
Formula: C11H21NO5 (247.142)
0.3 (100%) Macropus giganteus
[UBERON:0006093] precuneus cortex
MSI_000058719 Unreliable 247.1678 247.1678 ~ 247.1678
MzDiff: none
3-Hydroxybutyrylcarnitine (BioDeep_00000032827)
Formula: C11H21NO5 (247.142)
1.05 (100%) Mus musculus
[UBERON:0001950] neocortex
MSI_000060097 Unavailable 247.1678 247.1678 ~ 247.1678
MzDiff: none
3-Hydroxybutyrylcarnitine (BioDeep_00000032827)
Formula: C11H21NO5 (247.142)
-0.95 (100%) Mus musculus
[UBERON:0002298] brainstem
MSI_000060435 Unavailable 247.1678 247.1678 ~ 247.1678
MzDiff: none
3-Hydroxybutyrylcarnitine (BioDeep_00000032827)
Formula: C11H21NO5 (247.142)
-0.1 (100%) Mus musculus
[UBERON:0002421] hippocampal formation
MSI_000062096 Unreliable 247.1695 247.1695 ~ 247.1695
MzDiff: none
3-Hydroxybutyrylcarnitine (BioDeep_00000032827)
Formula: C11H21NO5 (247.142)
1.11 (100%) Mus musculus
[UBERON:0001950] neocortex

Found 12 Sample Hits
Metabolite Species Sample
alpha-Amylcinnamyl acetate

Formula: C16H22O2 (246.162)
Adducts: [M+H]+ (Ppm: 5.5)
Homo sapiens (esophagus)
LNTO22_1_3
Resolution: 75μm, 121x68

Description

alpha-Amylcinnamyl acetate

Formula: C16H22O2 (246.162)
Adducts: [M+H]+ (Ppm: 4.3)
Homo sapiens (esophagus)
LNTO29_16_2
Resolution: 17μm, 95x101

Description

alpha-Amylcinnamyl acetate

Formula: C16H22O2 (246.162)
Adducts: [M+H]+ (Ppm: 17.6)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

alpha-Amylcinnamyl acetate

Formula: C16H22O2 (246.162)
Adducts: [M+H]+ (Ppm: 6.7)
Homo sapiens (esophagus)
LNTO22_1_9
Resolution: 75μm, 89x74

Description

alpha-Amylcinnamyl acetate

Formula: C16H22O2 (246.162)
Adducts: [M+H]+ (Ppm: 6.3)
Homo sapiens (colorectal adenocarcinoma)
80TopL, 50TopR, 70BottomL, 60BottomR-profile
Resolution: 17μm, 137x136

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).

alpha-Amylcinnamyl acetate

Formula: C16H22O2 (246.162)
Adducts: [M+H]+ (Ppm: 3.9)
Homo sapiens (esophagus)
LNTO29_16_3
Resolution: 17μm, 108x107

Description

alpha-Amylcinnamyl acetate

Formula: C16H22O2 (246.162)
Adducts: [M+H]+ (Ppm: 5.1)
Homo sapiens (esophagus)
TO31T
Resolution: 75μm, 56x54

Description

alpha-Amylcinnamyl acetate

Formula: C16H22O2 (246.162)
Adducts: [M+H]+ (Ppm: 5.9)
Homo sapiens (esophagus)
TO29T
Resolution: 75μm, 56x48

Description

alpha-Amylcinnamyl acetate

Formula: C16H22O2 (246.162)
Adducts: [M+H]+ (Ppm: 5.9)
Homo sapiens (esophagus)
LNTO22_1_7
Resolution: 75μm, 69x54

Description

alpha-Amylcinnamyl acetate

Formula: C16H22O2 (246.162)
Adducts: [M+H]+ (Ppm: 3.9)
Homo sapiens (esophagus)
LNTO29_18_2
Resolution: 75μm, 62x68

Description

3-Hydroxybutyrylcarnitine

Formula: C11H21NO5 (247.142)
Adducts: [M-H2O+NH4]+ (Ppm: 17.3)
Mus musculus (brain)
Brain01_Bregma1-42_02_centroid
Resolution: 17μm, 434x258

Description

3-Hydroxybutyrylcarnitine

Formula: C11H21NO5 (247.142)
Adducts: [M-H2O+NH4]+ (Ppm: 15.7)
Mus musculus (brain)
Brain01_Bregma1-42_01_centroid
Resolution: 17μm, 447x118

Description