在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 6 Reference Ions Near m/z 247.0594
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000046518 Reliable 247.0507 247.0507 ~ 247.0507
MzDiff: none
Pyridoxal 5'-phosphate (BioDeep_00000001641)
Formula: C8H10NO6P (247.0246)
4.28 (100%) Mus musculus
[UBERON:0002107] liver
MSI_000016798 Unavailable 247.0594 247.0594 ~ 247.0594
MzDiff: 0.0 ppm
Isopimpinellin (BioDeep_00000000214)
Formula: C13H10O5 (246.0528)
-0.02 (100%) Vitis vinifera
[PO:0009086] endocarp
MSI_000003993 Unreliable 247.0604 247.0604 ~ 247.0604
MzDiff: none
Sulfamerazine (BioDeep_00000018010)
Formula: C11H12N4O2S (264.0681)
1.2 (100%) Homo sapiens
[UBERON:0002107] liver
MSI_000033503 Unreliable 247.0595 247.0595 ~ 247.0595
MzDiff: none
Isopimpinellin (BioDeep_00000000214)
Formula: C13H10O5 (246.0528)
1.89 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000037137 Unreliable 247.0596 247.0596 ~ 247.0596
MzDiff: none
Isopimpinellin (BioDeep_00000000214)
Formula: C13H10O5 (246.0528)
2.04 (100%) Posidonia oceanica
[UBERON:0000329] hair root
MSI_000039837 Unreliable 247.0598 247.0598 ~ 247.0598
MzDiff: none
Isopimpinellin (BioDeep_00000000214)
Formula: C13H10O5 (246.0528)
1.02 (100%) Posidonia oceanica
[PO:0005417] phloem

Found 10 Sample Hits
Metabolite Species Sample
Sulfamerazine

Formula: C11H12N4O2S (264.0681)
Adducts: [M+H-H2O]+ (Ppm: 17.8)
Homo sapiens (Liver)
20171107_FIT4_DHBpos_p70_s50
Resolution: 50μm, 70x70

Description

Isopimpinellin

Formula: C13H10O5 (246.0528)
Adducts: [M+H]+ (Ppm: 2.8)
Vitis vinifera (Fruit)
grape_dhb_91_1
Resolution: 50μm, 120x114

Description

Grape berries fruit, condition: Ripe

Isopimpinellin

Formula: C13H10O5 (246.0528)
Adducts: [M+H]+ (Ppm: 2.8)
Vitis vinifera (Fruit)
grape_dhb_164_1
Resolution: 17μm, 136x122

Description

Grape berries fruit, condition: Late

Isopimpinellin

Formula: C13H10O5 (246.0528)
Adducts: [M+H]+ (Ppm: 3.6)
Vitis vinifera (Fruit)
grape_dhb_163_1
Resolution: 17μm, 132x115

Description

Grape berries fruit, condition: Late

Isopimpinellin

Formula: C13H10O5 (246.0528)
Adducts: [M+H]+ (Ppm: 2.4)
Posidonia oceanica (root)
20190614_MS1_A19r-20
Resolution: 17μm, 262x276

Description

Seagrasses are one of the most efficient natural sinks of carbon dioxide (CO2) on Earth. Despite covering less than 0.1% of coastal regions, they have the capacity to bury up to 10% of marine organic matter and can bury the same amount of carbon 35 times faster than tropical rainforests. On land, the soil’s ability to sequestrate carbon is intimately linked to microbial metabolism. Despite the growing attention to the link between plant production, microbial communities, and the carbon cycle in terrestrial ecosystems, these processes remain enigmatic in the sea. Here, we show that seagrasses excrete organic sugars, namely in the form of sucrose, into their rhizospheres. Surprisingly, the microbial communities living underneath meadows do not fully use this sugar stock in their metabolism. Instead, sucrose piles up in the sediments to mM concentrations underneath multiple types of seagrass meadows. Sediment incubation experiments show that microbial communities living underneath a meadow use sucrose at low metabolic rates. Our metagenomic analyses revealed that the distinct community of microorganisms occurring underneath meadows is limited in their ability to degrade simple sugars, which allows these compounds to persist in the environment over relatively long periods of time. Our findings reveal how seagrasses form blue carbon stocks despite the relatively small area they occupy. Unfortunately, anthropogenic disturbances are threatening the long-term persistence of seagrass meadows. Given that these sediments contain a large stock of sugars that heterotopic bacteria can degrade, it is even more important to protect these ecosystems from degradation.

Isopimpinellin

Formula: C13H10O5 (246.0528)
Adducts: [M+H]+ (Ppm: 0.4)
Posidonia oceanica (root)
20190613_MS1_A19r-18
Resolution: 17μm, 246x264

Description

Isopimpinellin

Formula: C13H10O5 (246.0528)
Adducts: [M+H]+ (Ppm: 2)
Posidonia oceanica (root)
20190828_MS1_A19r-22
Resolution: 17μm, 292x279

Description

Isopimpinellin

Formula: C13H10O5 (246.0528)
Adducts: [M+H]+ (Ppm: 1.2)
Posidonia oceanica (root)
MS1_20180404_PO_1200
Resolution: 17μm, 193x208

Description

Pyridoxal 5'-phosphate

Formula: C8H10NO6P (247.0246)
Adducts: [M-H2O+NH4]+ (Ppm: 11.6)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

Sulfamerazine

Formula: C11H12N4O2S (264.0681)
Adducts: [M+H-H2O]+ (Ppm: 7.7)
Homo sapiens (esophagus)
LNTO22_1_8
Resolution: 75μm, 69x61

Description