在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 12 Reference Ions Near m/z 848.6301
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000046781 Reliable 848.6364 848.6364 ~ 848.6364
MzDiff: none
PS(16:0/24:0) (BioDeep_00000104717)
Formula: C46H90NO10P (847.6302)
3.43 (100%) Mus musculus
[UBERON:0002107] liver
MSI_000065190 Unreliable 848.6393 848.639 ~ 848.6394
MzDiff: 1.7 ppm
PS(16:0/24:0) (BioDeep_00000104717)
Formula: C46H90NO10P (847.6302)
5 (100%) Homo sapiens
[UBERON:0001155] colon
MSI_000060512 Unreliable 848.6375 848.6371 ~ 848.6376
MzDiff: 2.1 ppm
PS(16:0/24:0) (BioDeep_00000104717)
Formula: C46H90NO10P (847.6302)
3.49 (100%) Mus musculus
[UBERON:0002421] hippocampal formation
MSI_000002844 Unavailable 848.638 848.638 ~ 848.638
MzDiff: none
PS(16:0/24:0) (BioDeep_00000104717)
Formula: C46H90NO10P (847.6302)
-0.47 (100%) Rattus norvegicus
[UBERON:0001950] neocortex
MSI_000003488 Unavailable 848.638 848.638 ~ 848.638
MzDiff: none
PS(16:0/24:0) (BioDeep_00000104717)
Formula: C46H90NO10P (847.6302)
-0.5 (100%) Rattus norvegicus
[UBERON:0002037] cerebellum
MSI_000004772 Unreliable 848.638 848.638 ~ 848.638
MzDiff: none
PS(16:0/24:0) (BioDeep_00000104717)
Formula: C46H90NO10P (847.6302)
2.13 (100%) Rattus norvegicus
[UBERON:0002298] brainstem
MSI_000005697 Unavailable 848.638 848.638 ~ 848.638
MzDiff: none
PS(16:0/24:0) (BioDeep_00000104717)
Formula: C46H90NO10P (847.6302)
-0.49 (100%) Rattus norvegicus
[UBERON:0002435] striatum
MSI_000029098 Unreliable 848.6294 848.6294 ~ 848.6294
MzDiff: none
PA(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/24:1(15Z)) (BioDeep_00000107783)
Formula: C49H83O8P (830.5825)
2.04 (100%) Macropus giganteus
[UBERON:0002336] corpus callosum
MSI_000044491 Unavailable 848.6376 848.6376 ~ 848.6376
MzDiff: none
PS(16:0/24:0) (BioDeep_00000104717)
Formula: C46H90NO10P (847.6302)
-0.34 (100%) Rattus norvegicus
[UBERON:0002264] olfactory bulb
MSI_000059204 Unavailable 848.6371 848.6371 ~ 848.6371
MzDiff: none
PS(16:0/24:0) (BioDeep_00000104717)
Formula: C46H90NO10P (847.6302)
-0.86 (100%) Mus musculus
[UBERON:0001950] neocortex
MSI_000059593 Unreliable 848.6371 848.6371 ~ 848.6371
MzDiff: none
PS(16:0/24:0) (BioDeep_00000104717)
Formula: C46H90NO10P (847.6302)
1.1 (100%) Mus musculus
[UBERON:0002298] brainstem
MSI_000061382 Unreliable 848.6368 848.6368 ~ 848.6368
MzDiff: none
PS(16:0/24:0) (BioDeep_00000104717)
Formula: C46H90NO10P (847.6302)
0.07 (100%) Mus musculus
[UBERON:0000956] cerebral cortex

Found 6 Sample Hits
Metabolite Species Sample
PA(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/24:1(15Z))

Formula: C49H83O8P (830.5825)
Adducts: [M+NH4]+ (Ppm: 15.4)
Macropus giganteus (Brain)
170321_kangaroobrain-dan3-pos_maxof50.0_med1
Resolution: 50μm, 81x50

Description

Sample information Organism: Macropus giganteus (kangaroo) Organism part: Brain Condition: Wildtype Sample growth conditions: Wild

PS(16:0/24:0)

Formula: C46H90NO10P (847.6302)
Adducts: [M+H]+ (Ppm: 1.3)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

PS(16:0/24:0)

Formula: C46H90NO10P (847.6302)
Adducts: [M+H]+ (Ppm: 6.9)
Homo sapiens (colorectal adenocarcinoma)
80TopL, 50TopR, 70BottomL, 60BottomR-profile
Resolution: 17μm, 137x136

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).

m/z_848.6313

Formula: - (n/a)
Adducts: (Ppm: 0)
Homo sapiens (colorectal adenocarcinoma)
439TopL, 409TopR, 429BottomL, 419BottomR-profile
Resolution: 17μm, 157x136

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).

PS(16:0/24:0)

Formula: C46H90NO10P (847.6302)
Adducts: [M+H]+ (Ppm: 8.7)
Homo sapiens (NA)
160TopL,130TopR,150BottomL,140BottomR-profile
Resolution: 17μm, 142x136

Description

PS(16:0/24:0)

Formula: C46H90NO10P (847.6302)
Adducts: [M+H]+ (Ppm: 2.3)
Homo sapiens (colorectal adenocarcinoma)
200TopL, 170TopR, 190BottomL, 180BottomR-centroid
Resolution: 50μm, 132x126

Description