在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 8 Reference Ions Near m/z 840.6123
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000060742 Unreliable 840.6122 840.6122 ~ 840.6123
MzDiff: 0.5 ppm
PG(i-19:0/18:1(12Z)-2OH(9,10)) (BioDeep_00000196826)
Formula: C43H83O12P (822.5622)
2.01 (100%) Mus musculus
[UBERON:0002421] hippocampal formation
MSI_000002920 Unavailable 840.6214 840.6214 ~ 840.6214
MzDiff: none
SM(d19:0/22:6(5Z,8E,10Z,13Z,15E,19Z)-2OH(7S, 17S)) (BioDeep_00000215637)
Formula: C46H83N2O8P (822.5887)
-0.57 (100%) Rattus norvegicus
[UBERON:0001950] neocortex
MSI_000003638 Unavailable 840.6214 840.6214 ~ 840.6214
MzDiff: none
SM(d19:0/22:6(5Z,8E,10Z,13Z,15E,19Z)-2OH(7S, 17S)) (BioDeep_00000215637)
Formula: C46H83N2O8P (822.5887)
-0.79 (100%) Rattus norvegicus
[UBERON:0002037] cerebellum
MSI_000004849 Unreliable 840.6214 840.6214 ~ 840.6214
MzDiff: none
SM(d19:0/22:6(5Z,8E,10Z,13Z,15E,19Z)-2OH(7S, 17S)) (BioDeep_00000215637)
Formula: C46H83N2O8P (822.5887)
1.22 (100%) Rattus norvegicus
[UBERON:0002298] brainstem
MSI_000005795 Unavailable 840.6214 840.6214 ~ 840.6214
MzDiff: none
SM(d19:0/22:6(5Z,8E,10Z,13Z,15E,19Z)-2OH(7S, 17S)) (BioDeep_00000215637)
Formula: C46H83N2O8P (822.5887)
-0.66 (100%) Rattus norvegicus
[UBERON:0002435] striatum
MSI_000059095 Unavailable 840.6122 840.6122 ~ 840.6122
MzDiff: none
PG(i-19:0/18:1(12Z)-2OH(9,10)) (BioDeep_00000196826)
Formula: C43H83O12P (822.5622)
-0.68 (100%) Mus musculus
[UBERON:0001950] neocortex
MSI_000059482 Unreliable 840.6122 840.6122 ~ 840.6122
MzDiff: none
PG(i-19:0/18:1(12Z)-2OH(9,10)) (BioDeep_00000196826)
Formula: C43H83O12P (822.5622)
1.15 (100%) Mus musculus
[UBERON:0002298] brainstem
MSI_000061728 Unavailable 840.6123 840.6123 ~ 840.6123
MzDiff: none
PG(i-19:0/18:1(12Z)-2OH(9,10)) (BioDeep_00000196826)
Formula: C43H83O12P (822.5622)
-0.37 (100%) Mus musculus
[UBERON:0000956] cerebral cortex

Found 3 Sample Hits
Metabolite Species Sample
PE(22:0/20:3(5Z,8Z,11Z)-O(14R,15S))

Formula: C47H86NO9P (839.604)
Adducts: [M+H]+ (Ppm: 5.4)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

PG(i-19:0/18:1(12Z)-2OH(9,10))

Formula: C43H83O12P (822.5622)
Adducts: [M+NH4]+ (Ppm: 19.3)
Mus musculus (brain)
Brain01_Bregma-3-88b_centroid
Resolution: 17μm, 265x320

Description

PG(i-19:0/18:1(12Z)-2OH(9,10))

Formula: C43H83O12P (822.5622)
Adducts: [M+NH4]+ (Ppm: 19.4)
Mus musculus (brain)
Brain01_Bregma1-42_02_centroid
Resolution: 17μm, 434x258

Description