在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 8 Reference Ions Near m/z 832.5484
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000006404 Reliable 832.5554 832.5551 ~ 832.5559
MzDiff: 3.3 ppm
PA(21:0/6 keto-PGF1alpha) (BioDeep_00000190471)
Formula: C44H81O12P (832.5465)
5.87 (100%) Rattus norvegicus
[UBERON:0004358] caput epididymis
MSI_000046829 Reliable 832.5531 832.5531 ~ 832.5531
MzDiff: none
PE(20:2(11Z,14Z)/22:6(5Z,7Z,10Z,13Z,16Z,19Z)-OH(4)) (BioDeep_00000187098)
Formula: C47H78NO9P (831.5414)
3.29 (100%) Mus musculus
[UBERON:0002107] liver
MSI_000011498 Unreliable 832.5535 832.5535 ~ 832.5535
MzDiff: none
PE(20:2(11Z,14Z)/22:6(5Z,7Z,10Z,13Z,16Z,19Z)-OH(4)) (BioDeep_00000187098)
Formula: C47H78NO9P (831.5414)
0.01 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000009287 Unreliable 832.5535 832.5535 ~ 832.5535
MzDiff: none
PE(20:2(11Z,14Z)/22:6(5Z,7Z,10Z,13Z,16Z,19Z)-OH(4)) (BioDeep_00000187098)
Formula: C47H78NO9P (831.5414)
0.97 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000000977 Unavailable 832.5535 832.5535 ~ 832.5535
MzDiff: none
PE(20:2(11Z,14Z)/22:6(5Z,7Z,10Z,13Z,16Z,19Z)-OH(4)) (BioDeep_00000187098)
Formula: C47H78NO9P (831.5414)
-0.87 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000026444 Unreliable 832.5552 832.5552 ~ 832.5552
MzDiff: none
PE(20:0/20:4(6E,8Z,11Z,14Z)+=O(5)) (BioDeep_00000186860)
Formula: C45H80NO9P (809.557)
1.79 (100%) Mus musculus
[UBERON:0002048] lung
MSI_000028828 Unreliable 832.5478 832.5478 ~ 832.5478
MzDiff: none
Not Annotated 0.3 (0%) Macropus giganteus
[UBERON:0001891] midbrain
MSI_000030592 Unreliable 832.5416 832.5416 ~ 832.5416
MzDiff: none
PA(22:2(13Z,16Z)/22:6(5Z,8E,10Z,13Z,15E,19Z)-2OH(7S, 17S)) (BioDeep_00000190822)
Formula: C47H77O10P (832.5254)
1.48 (100%) Macropus giganteus
[UBERON:0003027] cingulate cortex

Found 6 Sample Hits
Metabolite Species Sample
PE(20:2(11Z,14Z)/22:6(5Z,7Z,10Z,13Z,16Z,19Z)-OH(4))

Formula: C47H78NO9P (831.5414)
Adducts: [M+H]+ (Ppm: 5.8)
Mus musculus (Urinary bladder)
HR2MSI_mouse_urinary_bladder - S096
Resolution: 10μm, 260x134

Description

Mass spectrometry imaging of phospholipids in mouse urinary bladder (imzML dataset)
The spatial distribution of phospholipids in a tissue section of mouse urinary bladder was analyzed by MALDI MS imaging at 10 micrometer pixel size with high mass resolution (using an LTQ Orbitrap mass spectrometer).

R, ö, mpp A, Guenther S, Schober Y, Schulz O, Takats Z, Kummer W, Spengler B, Histology by mass spectrometry: label-free tissue characterization obtained from high-accuracy bioanalytical imaging. Angew Chem Int Ed Engl, 49(22):3834-8(2010)

Fig. S2: Single ion images of compounds shown in Fig. 1A-B : (upper left to lower right) m/z = 743.5482 (unknown), m/z = 741.5307 (SM (16:0), [M+K]+), m/z = 798.5410 (PC (34:1), [M+K]+), m/z = 616.1767 (heme b, M+), m/z = 772.5253 (PC (32:0), [M+K]+).

Stability of determined mass values was in the range of +/- 1 ppm over 22 hours of measurement (Fig. S4), with a standard deviation of 0.56 ppm. Accuracy data were obtained during tissue scanning experiments by monitoring the mass signal at nominal mass 798. The internal lock mass function of the Orbitrap instrument was used for automatic calibration during imaging measurements, using the known matrix-related ion signals at m/z = 137.0233, m/z = 444.0925 and m/z = 716.1246.

PA(21:0/6 keto-PGF1alpha)

Formula: C44H81O12P (832.5465)
Adducts: [M]+ (Ppm: 2.9)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_46
Resolution: 17μm, 298x106

Description

PE(20:0/20:4(6E,8Z,11Z,14Z)+=O(5))

Formula: C45H80NO9P (809.557)
Adducts: [M+Na]+ (Ppm: 10.7)
Mus musculus (Lung)
image5
Resolution: 40μm, 163x183

Description

Supplementary Figure S8. MALDI-MSI data of mouse lung tissue administered with D9-choline and U 13C-DPPC–containing Poractant alfa surfactant (labels administered 18 h prior to sacrifice). Ion images of (a) m/z 796.6856 ([U13C-DPPC+Na]+), (b) m/z 756.5154 [PC32:0+Na]+ and (c) m/z 765.6079 ([D9-PC32:0+Na]+). (d) Overlay image of [U13C-DPPC+Na]+ (red) and [D9-PC32:0+Na]+ (green). Parts per million (ppm) mass errors are indicated in parentheses. All images were visualised using totalion-current normalisation and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0.

m/z_832.5478

Formula: - (n/a)
Adducts: (Ppm: 0)
Macropus giganteus (Brain)
170321_kangaroobrain-dan3-pos_maxof50.0_med1
Resolution: 50μm, 81x50

Description

Sample information Organism: Macropus giganteus (kangaroo) Organism part: Brain Condition: Wildtype Sample growth conditions: Wild

PE(20:2(11Z,14Z)/22:6(5Z,7Z,10Z,13Z,16Z,19Z)-OH(4))

Formula: C47H78NO9P (831.5414)
Adducts: [M+H]+ (Ppm: 1.4)
Homo sapiens (esophagus)
LNTO22_1_3
Resolution: 75μm, 121x68

Description

PE(20:2(11Z,14Z)/22:6(5Z,7Z,10Z,13Z,16Z,19Z)-OH(4))

Formula: C47H78NO9P (831.5414)
Adducts: [M+H]+ (Ppm: 5.3)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.