在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 6 Reference Ions Near m/z 800.4403
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000046323 Reliable 800.4384 800.4384 ~ 800.4384
MzDiff: none
PS(14:1(9Z)/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) (BioDeep_00000205968)
Formula: C40H66NO13P (799.4272)
5.21 (100%) Mus musculus
[UBERON:0002107] liver
MSI_000022088 Unreliable 800.4411 800.4411 ~ 800.4411
MzDiff: none
PS(14:1(9Z)/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) (BioDeep_00000205968)
Formula: C40H66NO13P (799.4272)
0.45 (100%) Mus musculus
[UBERON:0001499] muscle of arm
MSI_000002779 Unavailable 800.4393 800.4393 ~ 800.4393
MzDiff: none
Leucomycin A6 (BioDeep_00000009673)
Formula: C40H65NO15 (799.4354)
-0.42 (100%) Rattus norvegicus
[UBERON:0001950] neocortex
MSI_000003420 Unavailable 800.4393 800.4393 ~ 800.4393
MzDiff: none
Leucomycin A6 (BioDeep_00000009673)
Formula: C40H65NO15 (799.4354)
-0.42 (100%) Rattus norvegicus
[UBERON:0002037] cerebellum
MSI_000005151 Unavailable 800.4393 800.4393 ~ 800.4393
MzDiff: none
Leucomycin A6 (BioDeep_00000009673)
Formula: C40H65NO15 (799.4354)
-0.61 (100%) Rattus norvegicus
[UBERON:0002298] brainstem
MSI_000005468 Unreliable 800.4393 800.4393 ~ 800.4393
MzDiff: none
Leucomycin A6 (BioDeep_00000009673)
Formula: C40H65NO15 (799.4354)
2.28 (100%) Rattus norvegicus
[UBERON:0002435] striatum

Found 6 Sample Hits
Metabolite Species Sample
Leucomycin A6

Formula: C40H65NO15 (799.4354)
Adducts: [M+H]+ (Ppm: 4.2)
Rattus norvegicus (Brain)
Spectroswiss - sol_2x_br_2
Resolution: 17μm, 488x193

Description

PS(14:1(9Z)/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15))

Formula: C40H66NO13P (799.4272)
Adducts: [M+H]+ (Ppm: 8.3)
Mus musculus (Left upper arm)
357_l_total ion count
Resolution: 50μm, 97x131

Description

Diseased

PS(14:1(9Z)/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15))

Formula: C40H66NO13P (799.4272)
Adducts: [M+H]+ (Ppm: 7.3)
Mus musculus (Lung)
image3
Resolution: 40μm, 146x190

Description

Fig. 4 MALDI-MSI data of mouse lung tissue after administration with D9-choline and U13C-DPPC–containing Poractant alfa surfactant (labels administered 12 h prior to tissue collection). Ion images of (A) m/z 796.6856 ([U13C-DPPC+Na]+), (B) m/z 756.5154 [PC32:0+Na]+), and (C) m/z 765.6079 ([D9-PC32:0+Na]+). D: Overlay image of [U13C-PC32:0+Na]+ (red) and [D9-PC32:0+Na]+ (green). Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

PS(14:1(9Z)/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15))

Formula: C40H66NO13P (799.4272)
Adducts: [M+H]+ (Ppm: 1)
Mus musculus (Lung)
image5
Resolution: 40μm, 163x183

Description

Supplementary Figure S8. MALDI-MSI data of mouse lung tissue administered with D9-choline and U 13C-DPPC–containing Poractant alfa surfactant (labels administered 18 h prior to sacrifice). Ion images of (a) m/z 796.6856 ([U13C-DPPC+Na]+), (b) m/z 756.5154 [PC32:0+Na]+ and (c) m/z 765.6079 ([D9-PC32:0+Na]+). (d) Overlay image of [U13C-DPPC+Na]+ (red) and [D9-PC32:0+Na]+ (green). Parts per million (ppm) mass errors are indicated in parentheses. All images were visualised using totalion-current normalisation and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0.

m/z_800.4424

Formula: - (n/a)
Adducts: (Ppm: 0)
Mus musculus (Lung)
image5
Resolution: 40μm, 163x183

Description

Supplementary Figure S8. MALDI-MSI data of mouse lung tissue administered with D9-choline and U 13C-DPPC–containing Poractant alfa surfactant (labels administered 18 h prior to sacrifice). Ion images of (a) m/z 796.6856 ([U13C-DPPC+Na]+), (b) m/z 756.5154 [PC32:0+Na]+ and (c) m/z 765.6079 ([D9-PC32:0+Na]+). (d) Overlay image of [U13C-DPPC+Na]+ (red) and [D9-PC32:0+Na]+ (green). Parts per million (ppm) mass errors are indicated in parentheses. All images were visualised using totalion-current normalisation and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0.

PS(14:1(9Z)/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15))

Formula: C40H66NO13P (799.4272)
Adducts: [M+H]+ (Ppm: 5)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.