在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 6 Reference Ions Near m/z 789.5834
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000008530 Unreliable 789.5835 789.5834 ~ 789.5838
MzDiff: 1.8 ppm
PS(18:0/18:1(9Z)) (BioDeep_00000019314)
Formula: C42H80NO10P (789.552)
4.72 (100%) Rattus norvegicus
[UBERON:0004360] cauda epididymis
MSI_000008717 Unreliable 789.5905 789.5904 ~ 789.5908
MzDiff: 1.7 ppm
PS(18:0/18:1(9Z)) (BioDeep_00000019314)
Formula: C42H80NO10P (789.552)
6.27 (100%) Rattus norvegicus
[UBERON:0004360] cauda epididymis
MSI_000053099 Unreliable 789.5793 789.5793 ~ 789.5793
MzDiff: none
PC(20:5(5Z,8Z,11Z,14Z,17Z)/P-18:1(11Z)) (BioDeep_00000029780)
Formula: C46H80NO7P (789.5672)
2.96 (100%) DESI
[NOVOCELL:BACKGROUND] blank
MSI_000043909 Unreliable 789.5912 789.5912 ~ 789.5912
MzDiff: none
PC(20:5(5Z,8Z,11Z,14Z,17Z)/P-18:1(11Z)) (BioDeep_00000029780)
Formula: C46H80NO7P (789.5672)
1.19 (100%) Homo sapiens
[UBERON:0001043] esophagus
MSI_000058347 Unreliable 789.5889 789.5889 ~ 789.5889
MzDiff: 0.1 ppm
PS(18:0/18:1(9Z)) (BioDeep_00000019314)
Formula: C42H80NO10P (789.552)
1.19 (100%) Homo sapiens
[UBERON:0007779] transudate
MSI_000044756 Unavailable 789.5899 789.5899 ~ 789.5899
MzDiff: none
PS(18:0/18:1(9Z)) (BioDeep_00000019314)
Formula: C42H80NO10P (789.552)
-0.45 (100%) Rattus norvegicus
[UBERON:0002264] olfactory bulb

Found 10 Sample Hits
Metabolite Species Sample
PS(18:0/18:1(9Z))

Formula: C42H80NO10P (789.552)
Adducts: [M-H2O+NH4]+ (Ppm: 19.6)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_44
Resolution: 17μm, 299x111

Description

PS(18:0/18:1(9Z))

Formula: C42H80NO10P (789.552)
Adducts: [M-H2O+NH4]+ (Ppm: 19.4)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_46
Resolution: 17μm, 298x106

Description

PS(18:0/18:1(9Z))

Formula: C42H80NO10P (789.552)
Adducts: [M-H2O+NH4]+ (Ppm: 19.1)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_47
Resolution: 17μm, 301x111

Description

PS(18:0/18:1(9Z))

Formula: C42H80NO10P (789.552)
Adducts: [M-H2O+NH4]+ (Ppm: 19.2)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_48
Resolution: 17μm, 294x107

Description

PS(18:0/18:1(9Z))

Formula: C42H80NO10P (789.552)
Adducts: [M-H2O+NH4]+ (Ppm: 19.4)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito03_14
Resolution: 17μm, 205x103

Description

PS(18:0/18:1(9Z))

Formula: C42H80NO10P (789.552)
Adducts: [M-H2O+NH4]+ (Ppm: 18.2)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

PC(20:5(5Z,8Z,11Z,14Z,17Z)/P-18:1(11Z))

Formula: C46H80NO7P (789.5672)
Adducts: [M-H2O+NH4]+ (Ppm: 14.1)
Homo sapiens (colorectal adenocarcinoma)
80TopL, 50TopR, 70BottomL, 60BottomR-profile
Resolution: 17μm, 137x136

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).

PS(18:0/18:1(9Z))

Formula: C42H80NO10P (789.552)
Adducts: [M-H2O+NH4]+ (Ppm: 4.3)
Homo sapiens (colorectal adenocarcinoma)
439TopL, 409TopR, 429BottomL, 419BottomR-profile
Resolution: 17μm, 157x136

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).

PS(18:0/18:1(9Z))

Formula: C42H80NO10P (789.552)
Adducts: [M-H2O+NH4]+ (Ppm: 17.3)
Homo sapiens (esophagus)
LNTO29_16_3
Resolution: 17μm, 108x107

Description

PS(18:0/18:1(9Z))

Formula: C42H80NO10P (789.552)
Adducts: [M-H2O+NH4]+ (Ppm: 18.2)
Homo sapiens (esophagus)
LNTO22_1_8
Resolution: 75μm, 69x61

Description