在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 14 Reference Ions Near m/z 725.4021
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000046253 Reliable 725.3974 725.3974 ~ 725.3974
MzDiff: none
Alliospiroside C (BioDeep_00000020239)
Formula: C38H60O13 (724.4034)
5.47 (100%) Mus musculus
[UBERON:0002107] liver
MSI_000021677 Unreliable 725.3934 725.3934 ~ 725.3934
MzDiff: none
PG(i-12:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) (BioDeep_00000196115)
Formula: C38H65O13P (760.4163)
0.74 (100%) Mus musculus
[UBERON:0001499] muscle of arm
MSI_000002454 Unreliable 725.3921 725.3921 ~ 725.3921
MzDiff: none
(7e)-12-(hydroxymethyl)-22-{[(3z,4z)-4-(5-hydroxypentan-2-ylidene)-2-(2-methylpropyl)oxolan-3-ylidene]methyl}-8,12-dimethyl-17-(2-methylpropyl)-10,14,19,24-tetraoxa-23,25-diazatetracyclo[19.2.1.1²,⁵.0⁹,¹³]pentacosa-1(23),2,4,7-tetraene-11,15,18-trione (BioDeep_00002143257)
Formula: C40H56N2O10 (724.3935)
1.17 (100%) Rattus norvegicus
[UBERON:0001950] neocortex
MSI_000003147 Unreliable 725.3921 725.3921 ~ 725.3921
MzDiff: none
(7e)-12-(hydroxymethyl)-22-{[(3z,4z)-4-(5-hydroxypentan-2-ylidene)-2-(2-methylpropyl)oxolan-3-ylidene]methyl}-8,12-dimethyl-17-(2-methylpropyl)-10,14,19,24-tetraoxa-23,25-diazatetracyclo[19.2.1.1²,⁵.0⁹,¹³]pentacosa-1(23),2,4,7-tetraene-11,15,18-trione (BioDeep_00002143257)
Formula: C40H56N2O10 (724.3935)
1.74 (100%) Rattus norvegicus
[UBERON:0002037] cerebellum
MSI_000005295 Unavailable 725.3921 725.3921 ~ 725.3921
MzDiff: none
(7e)-12-(hydroxymethyl)-22-{[(3z,4z)-4-(5-hydroxypentan-2-ylidene)-2-(2-methylpropyl)oxolan-3-ylidene]methyl}-8,12-dimethyl-17-(2-methylpropyl)-10,14,19,24-tetraoxa-23,25-diazatetracyclo[19.2.1.1²,⁵.0⁹,¹³]pentacosa-1(23),2,4,7-tetraene-11,15,18-trione (BioDeep_00002143257)
Formula: C40H56N2O10 (724.3935)
-0.87 (100%) Rattus norvegicus
[UBERON:0002298] brainstem
MSI_000005651 Unavailable 725.3921 725.3921 ~ 725.3921
MzDiff: none
(7e)-12-(hydroxymethyl)-22-{[(3z,4z)-4-(5-hydroxypentan-2-ylidene)-2-(2-methylpropyl)oxolan-3-ylidene]methyl}-8,12-dimethyl-17-(2-methylpropyl)-10,14,19,24-tetraoxa-23,25-diazatetracyclo[19.2.1.1²,⁵.0⁹,¹³]pentacosa-1(23),2,4,7-tetraene-11,15,18-trione (BioDeep_00002143257)
Formula: C40H56N2O10 (724.3935)
-0.38 (100%) Rattus norvegicus
[UBERON:0002435] striatum
MSI_000022456 Unreliable 725.4104 725.4104 ~ 725.4104
MzDiff: none
Not Annotated 1.7 (0%) Mus musculus
[UBERON:0004250] upper arm bone
MSI_000023264 Unreliable 725.3934 725.3934 ~ 725.3934
MzDiff: none
PG(i-12:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) (BioDeep_00000196115)
Formula: C38H65O13P (760.4163)
0.41 (100%) Mus musculus
[UBERON:0004250] upper arm bone
MSI_000024502 Unreliable 725.4008 725.4008 ~ 725.4008
MzDiff: none
Alliospiroside C (BioDeep_00000020239)
Formula: C38H60O13 (724.4034)
1.78 (100%) Mus musculus
[UBERON:0004269] upper arm connective tissue
MSI_000060060 Unavailable 725.3923 725.3923 ~ 725.3923
MzDiff: none
Dalargin (BioDeep_00000177934)
Formula: C35H51N9O8 (725.386)
-0.88 (100%) Mus musculus
[UBERON:0002298] brainstem
MSI_000060483 Unavailable 725.3923 725.3923 ~ 725.3923
MzDiff: none
Dalargin (BioDeep_00000177934)
Formula: C35H51N9O8 (725.386)
-0.2 (100%) Mus musculus
[UBERON:0002421] hippocampal formation
MSI_000061568 Unavailable 725.4021 725.4021 ~ 725.4021
MzDiff: none
Dalargin (BioDeep_00000177934)
Formula: C35H51N9O8 (725.386)
-0.35 (100%) Mus musculus
[UBERON:0000956] cerebral cortex
MSI_000062396 Unavailable 725.4021 725.4021 ~ 725.4021
MzDiff: none
Dalargin (BioDeep_00000177934)
Formula: C35H51N9O8 (725.386)
-0.35 (100%) Mus musculus
[UBERON:0001950] neocortex
MSI_000062826 Unavailable 725.4021 725.4021 ~ 725.4021
MzDiff: none
Dalargin (BioDeep_00000177934)
Formula: C35H51N9O8 (725.386)
-0.35 (100%) Mus musculus
[UBERON:0002421] hippocampal formation

Found 4 Sample Hits
Metabolite Species Sample
Alliospiroside C

Formula: C38H60O13 (724.4034)
Adducts: [M+H]+ (Ppm: 13.6)
Mus musculus (Left upper arm)
357_l_total ion count
Resolution: 50μm, 97x131

Description

Diseased

PG(i-12:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15))

Formula: C38H65O13P (760.4163)
Adducts: [M+H-2H2O]+ (Ppm: 6.8)
Homo sapiens (esophagus)
LNTO22_1_4
Resolution: 17μm, 82x80

Description

Alliospiroside C

Formula: C38H60O13 (724.4034)
Adducts: [M+H]+ (Ppm: 18.3)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

Dalargin

Formula: C35H51N9O8 (725.386)
Adducts: [M-H2O+NH4]+ (Ppm: 9.9)
Mus musculus (brain)
Brain01_Bregma1-42_02_centroid
Resolution: 17μm, 434x258

Description