在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 19 Reference Ions Near m/z 681.0971
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000054066 Unreliable 681.0882 681.0882 ~ 681.0884
MzDiff: 0.8 ppm
Not Annotated 3.49 (%) MALDI - CHCA
[NOVOCELL:BACKGROUND] blank
MSI_000011198 Unreliable 681.0903 681.0903 ~ 681.0903
MzDiff: none
Cyclic diadenylate (BioDeep_00002053051)
Formula: C20H24N10O12P2 (658.105)
1.81 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000011200 Unreliable 681.0971 681.0971 ~ 681.0971
MzDiff: none
(1s,2s,3s,11r,14r)-3-[(1s,3r,11r,14s)-14,18-dimethyl-13,17-dioxo-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.0¹,¹².0³,¹¹.0⁴,⁹]octadeca-4,6,8-trien-3-yl]-2-hydroxy-14,18-dimethyl-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.0¹,¹².0³,¹¹.0⁴,⁹]octadeca-4,6,8-triene-13,17-dione (BioDeep_00002059691)
Formula: C30H28N6O5S4 (680.1004)
1.8 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000011219 Unreliable 681.1037 681.1037 ~ 681.1037
MzDiff: none
Not Annotated 1.76 (%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000010665 Unavailable 681.0875 681.0874 ~ 681.0875
MzDiff: 0.1 ppm
Cyclic diadenylate (BioDeep_00002053051)
Formula: C20H24N10O12P2 (658.105)
-2.42 (33%) Bathymodiolus
[UBERON:0009120] gill filament
MSI_000012141 Unavailable 681.0875 681.0875 ~ 681.0875
MzDiff: none
Not Annotated -0.95 (%) Bathymodiolus
[UBERON:2000211] gill lamella
MSI_000054610 Unreliable 681.088 681.088 ~ 681.088
MzDiff: none
Cyclic diadenylate (BioDeep_00002053051)
Formula: C20H24N10O12P2 (658.105)
1.91 (100%) MALDI - DHB
[NOVOCELL:BACKGROUND] blank
MSI_000009424 Unavailable 681.0903 681.0903 ~ 681.0903
MzDiff: none
Cyclic diadenylate (BioDeep_00002053051)
Formula: C20H24N10O12P2 (658.105)
-0.4 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000009421 Unavailable 681.0971 681.0971 ~ 681.0971
MzDiff: none
(1s,2s,3s,11r,14r)-3-[(1s,3r,11r,14s)-14,18-dimethyl-13,17-dioxo-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.0¹,¹².0³,¹¹.0⁴,⁹]octadeca-4,6,8-trien-3-yl]-2-hydroxy-14,18-dimethyl-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.0¹,¹².0³,¹¹.0⁴,⁹]octadeca-4,6,8-triene-13,17-dione (BioDeep_00002059691)
Formula: C30H28N6O5S4 (680.1004)
-0.39 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000009406 Unavailable 681.1037 681.1037 ~ 681.1037
MzDiff: none
Not Annotated -0.33 (%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000012764 Unavailable 681.0874 681.0874 ~ 681.0874
MzDiff: none
Not Annotated -0.45 (%) Plant
[PO:0005020] vascular bundle
MSI_000014232 Unavailable 681.0874 681.0874 ~ 681.0874
MzDiff: none
Not Annotated -0.41 (%) Plant
[PO:0005417] phloem
MSI_000014835 Unavailable 681.0874 681.0874 ~ 681.0874
MzDiff: none
Not Annotated -0.46 (%) Plant
[PO:0006036] root epidermis
MSI_000018221 Unreliable 681.0874 681.0874 ~ 681.0874
MzDiff: none
Not Annotated 1.79 (%) Plant
[PO:0020124] root stele
MSI_000019827 Unavailable 681.0874 681.0874 ~ 681.0874
MzDiff: none
Not Annotated -0.46 (%) Plant
[PO:0025197] stele
MSI_000040482 Unavailable 681.0882 681.0882 ~ 681.0882
MzDiff: none
Not Annotated -0.22 (%) Posidonia oceanica
[PO:0005417] phloem
MSI_000000969 Unavailable 681.0903 681.0903 ~ 681.0903
MzDiff: none
Cyclic diadenylate (BioDeep_00002053051)
Formula: C20H24N10O12P2 (658.105)
-0.86 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000000973 Unavailable 681.0971 681.0971 ~ 681.0971
MzDiff: none
(1s,2s,3s,11r,14r)-3-[(1s,3r,11r,14s)-14,18-dimethyl-13,17-dioxo-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.0¹,¹².0³,¹¹.0⁴,⁹]octadeca-4,6,8-trien-3-yl]-2-hydroxy-14,18-dimethyl-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.0¹,¹².0³,¹¹.0⁴,⁹]octadeca-4,6,8-triene-13,17-dione (BioDeep_00002059691)
Formula: C30H28N6O5S4 (680.1004)
-0.87 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000000981 Unavailable 681.1037 681.1037 ~ 681.1037
MzDiff: none
Not Annotated -0.88 (%) Mus musculus
[CL:0000066] epithelial cell

Found 3 Sample Hits
Metabolite Species Sample
(1s,2s,3s,11r,14r)-3-[(1s,3r,11r,14s)-14,18-dimethyl-13,17-dioxo-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.0¹,¹².0³,¹¹.0⁴,⁹]octadeca-4,6,8-trien-3-yl]-2-hydroxy-14,18-dimethyl-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.0¹,¹².0³,¹¹.0⁴,⁹]octadeca-4,6,8-triene-13,17-dione

Formula: C30H28N6O5S4 (680.1004)
Adducts: [M+H]+ (Ppm: 15.5)
Mus musculus (Urinary bladder)
HR2MSI_mouse_urinary_bladder - S096
Resolution: 10μm, 260x134

Description

Mass spectrometry imaging of phospholipids in mouse urinary bladder (imzML dataset)
The spatial distribution of phospholipids in a tissue section of mouse urinary bladder was analyzed by MALDI MS imaging at 10 micrometer pixel size with high mass resolution (using an LTQ Orbitrap mass spectrometer).

R, ö, mpp A, Guenther S, Schober Y, Schulz O, Takats Z, Kummer W, Spengler B, Histology by mass spectrometry: label-free tissue characterization obtained from high-accuracy bioanalytical imaging. Angew Chem Int Ed Engl, 49(22):3834-8(2010)

Fig. S2: Single ion images of compounds shown in Fig. 1A-B : (upper left to lower right) m/z = 743.5482 (unknown), m/z = 741.5307 (SM (16:0), [M+K]+), m/z = 798.5410 (PC (34:1), [M+K]+), m/z = 616.1767 (heme b, M+), m/z = 772.5253 (PC (32:0), [M+K]+).

Stability of determined mass values was in the range of +/- 1 ppm over 22 hours of measurement (Fig. S4), with a standard deviation of 0.56 ppm. Accuracy data were obtained during tissue scanning experiments by monitoring the mass signal at nominal mass 798. The internal lock mass function of the Orbitrap instrument was used for automatic calibration during imaging measurements, using the known matrix-related ion signals at m/z = 137.0233, m/z = 444.0925 and m/z = 716.1246.

m/z_681.0924

Formula: - (n/a)
Adducts: (Ppm: )
Mus musculus (Lung)
image1
Resolution: 40μm, 187x165

Description

Fig. 2 MALDI-MSI data from the same mouse lung tissue analyzed in Fig. 1. A: Optical image of the post-MSI, H&E-stained tissue section. B–D, F–G: Ion images of (B) m/z 796.6855 ([U13C-DPPC+Na]+), (C) m/z 756.5514 ([PC32:0+Na]+), (D) m/z 765.6079 ([D9-PC32:0+Na]+), (F) m/z 754.5359 ([PC32:1+Na]+), and (G) m/z 763.5923 ([D9-PC32:1+Na]+). E, H: Ratio images of (E) [D9-PC32:0+Na]+:[PC32:0+Na]+ and (H) [D9-PC32:1+Na]+:[PC32:1+Na]+. Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. U13C-DPPC, universally 13C-labeled dipalmitoyl PC; PC, phosphatidylcholine; MSI, mass spectrometry imaging; H&E, hematoxylin and eosin. Fig 1-3, Fig S1-S3, S5

Eujambin

Formula: C30H26O17 (658.117)
Adducts: [M+Na]+ (Ppm: 19.7)
Mus musculus (Lung)
image4
Resolution: 40μm, 162x156

Description

Fig 6c Fig. 6 MALDI-MSI of U13C-PC16:0/16:0 acyl chain remodeling. A: Averaged MALDI mass spectrum from lung tissue collected from mice euthanized 12 h after administration of D9-choline and U13C-DPPC–containing Poractant alfa surfactant. The ion at m/z 828.6321 is assigned as the [M+Na]+ ion of 13C24-PC16:0_20:4 formed by acyl remodeling of U13C-PC16:0/16:0. The “NL” value refers to the intensity of the base peak in the full range MS1 spectrum. B: MS/MS spectrum of precursor ions at m/z 828.5 ± 0.5 with fragment ions originating from [13C24-PC16:0_20:4+Na]+ annotated. Part-per-million (ppm) mass errors are provided in parentheses. C, D: MALDI-MSI data of [U13C-DPPC+Na]+ (blue), [PC36:4+Na]+ (green) and [13C24-PC16:0_20:4+Na]+ (red) in lung tissue collected from mice (C) 12 h and (D) 18 h after label administration. All images were visualized using total-ion-current normalization and hotspot removal (high quantile = 99%). MS/MS, tandem mass spectrometry; MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.