在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 11 Reference Ions Near m/z 493.0625
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000046835 Reliable 493.0625 493.0625 ~ 493.0625
MzDiff: none
[3-Methoxy-2-phosphonooxy-6-[(E)-2-(3,4,5-trimethoxyphenyl)ethenyl]phenyl] dihydrogen phosphate (BioDeep_00000181974)
Formula: C18H22O12P2 (492.0586)
3.26 (100%) Mus musculus
[UBERON:0002107] liver
MSI_000053843 Unreliable 493.0533 493.0532 ~ 493.0536
MzDiff: 1.6 ppm
epicoccin M (BioDeep_00000366613)
Formula: C19H22N2O6S3 (470.064)
4.14 (100%) MALDI - CHCA
[NOVOCELL:BACKGROUND] blank
MSI_000013078 Unavailable 493.0539 493.0539 ~ 493.0539
MzDiff: none
4,7-Phenylsulfonyl-1,10-phenanthroline (BioDeep_00000174545)
Formula: C24H16N2O6S2 (492.045)
-0.67 (100%) Plant
[PO:0005020] vascular bundle
MSI_000013726 Unreliable 493.0539 493.0539 ~ 493.0539
MzDiff: none
4,7-Phenylsulfonyl-1,10-phenanthroline (BioDeep_00000174545)
Formula: C24H16N2O6S2 (492.045)
0.28 (100%) Plant
[PO:0005417] phloem
MSI_000018684 Unreliable 493.0539 493.0539 ~ 493.0539
MzDiff: none
4,7-Phenylsulfonyl-1,10-phenanthroline (BioDeep_00000174545)
Formula: C24H16N2O6S2 (492.045)
1.64 (100%) Plant
[PO:0020124] root stele
MSI_000019967 Unavailable 493.0539 493.0539 ~ 493.0539
MzDiff: none
4,7-Phenylsulfonyl-1,10-phenanthroline (BioDeep_00000174545)
Formula: C24H16N2O6S2 (492.045)
-0.5 (100%) Plant
[PO:0025197] stele
MSI_000032774 Unreliable 493.0527 493.0527 ~ 493.0527
MzDiff: none
epicoccin M (BioDeep_00000366613)
Formula: C19H22N2O6S3 (470.064)
0.3 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000033997 Unreliable 493.0527 493.0527 ~ 493.0527
MzDiff: none
epicoccin M (BioDeep_00000366613)
Formula: C19H22N2O6S3 (470.064)
0.11 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000035012 Unavailable 493.0527 493.0527 ~ 493.0527
MzDiff: none
epicoccin M (BioDeep_00000366613)
Formula: C19H22N2O6S3 (470.064)
-0.39 (100%) Posidonia oceanica
[PO:0006036] root epidermis
MSI_000035708 Unavailable 493.0527 493.0527 ~ 493.0527
MzDiff: none
epicoccin M (BioDeep_00000366613)
Formula: C19H22N2O6S3 (470.064)
-0.3 (100%) Posidonia oceanica
[PO:0006203] pericycle
MSI_000040000 Unreliable 493.0532 493.0532 ~ 493.0532
MzDiff: none
epicoccin M (BioDeep_00000366613)
Formula: C19H22N2O6S3 (470.064)
0.24 (100%) Posidonia oceanica
[PO:0005417] phloem

Found 4 Sample Hits
Metabolite Species Sample
epicoccin M

Formula: C19H22N2O6S3 (470.064)
Adducts: [M+Na]+ (Ppm: 0)
Posidonia oceanica (root)
MS1_20180404_PO_1200
Resolution: 17μm, 193x208

Description

[3-Methoxy-2-phosphonooxy-6-[(E)-2-(3,4,5-trimethoxyphenyl)ethenyl]phenyl] dihydrogen phosphate

Formula: C18H22O12P2 (492.0586)
Adducts: [M+H]+ (Ppm: 6.9)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

[3-Methoxy-2-phosphonooxy-6-[(E)-2-(3,4,5-trimethoxyphenyl)ethenyl]phenyl] dihydrogen phosphate

Formula: C18H22O12P2 (492.0586)
Adducts: [M+H]+ (Ppm: 8)
Homo sapiens (colorectal adenocarcinoma)
80TopL, 50TopR, 70BottomL, 60BottomR-profile
Resolution: 17μm, 137x136

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).

[3-Methoxy-2-phosphonooxy-6-[(E)-2-(3,4,5-trimethoxyphenyl)ethenyl]phenyl] dihydrogen phosphate

Formula: C18H22O12P2 (492.0586)
Adducts: [M+H]+ (Ppm: 9.8)
Homo sapiens (colorectal adenocarcinoma)
520TopL, 490TopR, 510BottomL, 500BottomR-profile
Resolution: 17μm, 147x131

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).