在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 15 Reference Ions Near m/z 486.9942
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000053877 Reliable 487.0036 487.0033 ~ 487.0039
MzDiff: 2.2 ppm
Not Annotated 4.02 (%) MALDI - CHCA
[NOVOCELL:BACKGROUND] blank
MSI_000015367 Reliable 487.0039 487.0039 ~ 487.0039
MzDiff: 0.2 ppm
Not Annotated 5.11 (%) Vitis vinifera
[PO:0009085] exocarp
MSI_000011099 Unreliable 486.9865 486.9865 ~ 486.9865
MzDiff: none
Not Annotated 2.15 (%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000011000 Unreliable 486.9942 486.9942 ~ 486.9942
MzDiff: none
Lamivudine-triphosphate (BioDeep_00000054185)
Formula: C8H14N3O12P3S (468.9511)
2.66 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000010953 Unreliable 487.0018 487.0018 ~ 487.0018
MzDiff: none
Phosphoaminophosphonic acid-guanylate ester (BioDeep_00000179629)
Formula: C10H17N6O13P3 (522.0066)
2.81 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000025452 Unreliable 487.0034 487.0034 ~ 487.0035
MzDiff: 0.2 ppm
1,1,2,2-Tetrahydroperfluoro-1-decanol (BioDeep_00000175044)
Formula: C10H5F17O (464.0069)
3.21 (100%) Mus musculus
[UBERON:0000913] interstitial fluid
MSI_000010674 Unavailable 487.004 487.004 ~ 487.004
MzDiff: 0.0 ppm
Carbovir Triphosphate (BioDeep_00000054829)
Formula: C11H16N5O11P3 (487.0059)
-2.48 (100%) Bathymodiolus
[UBERON:0009120] gill filament
MSI_000009593 Unavailable 486.9865 486.9865 ~ 486.9865
MzDiff: none
Not Annotated -1.02 (%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000009653 Unavailable 486.9942 486.9942 ~ 486.9942
MzDiff: none
Lamivudine-triphosphate (BioDeep_00000054185)
Formula: C8H14N3O12P3S (468.9511)
-1.26 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000009671 Unavailable 487.0018 487.0018 ~ 487.0018
MzDiff: none
Phosphoaminophosphonic acid-guanylate ester (BioDeep_00000179629)
Formula: C10H17N6O13P3 (522.0066)
-1.33 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000012296 Unavailable 487.004 487.004 ~ 487.004
MzDiff: none
Carbovir Triphosphate (BioDeep_00000054829)
Formula: C11H16N5O11P3 (487.0059)
-1.27 (100%) Bathymodiolus
[UBERON:2000211] gill lamella
MSI_000000917 Unavailable 486.9865 486.9865 ~ 486.9865
MzDiff: none
Not Annotated -0.81 (%) Mus musculus
[CL:0000066] epithelial cell
MSI_000022596 Unreliable 486.9897 486.9897 ~ 486.9897
MzDiff: none
Lamivudine-triphosphate (BioDeep_00000054185)
Formula: C8H14N3O12P3S (468.9511)
1.55 (100%) Mus musculus
[UBERON:0004250] upper arm bone
MSI_000026223 Unreliable 487.0015 487.0015 ~ 487.0015
MzDiff: none
Phosphoaminophosphonic acid-guanylate ester (BioDeep_00000179629)
Formula: C10H17N6O13P3 (522.0066)
1.81 (100%) Mus musculus
[UBERON:0000913] interstitial fluid
MSI_000038090 Unavailable 487.0039 487.0039 ~ 487.0039
MzDiff: none
Not Annotated -0.28 (%) Posidonia oceanica
[UBERON:0000329] hair root

Found 5 Sample Hits
Metabolite Species Sample
Lamivudine-triphosphate

Formula: C8H14N3O12P3S (468.9511)
Adducts: [M+NH4]+ (Ppm: 19)
Mus musculus (Urinary bladder)
HR2MSI_mouse_urinary_bladder - S096
Resolution: 10μm, 260x134

Description

Mass spectrometry imaging of phospholipids in mouse urinary bladder (imzML dataset)
The spatial distribution of phospholipids in a tissue section of mouse urinary bladder was analyzed by MALDI MS imaging at 10 micrometer pixel size with high mass resolution (using an LTQ Orbitrap mass spectrometer).

R, ö, mpp A, Guenther S, Schober Y, Schulz O, Takats Z, Kummer W, Spengler B, Histology by mass spectrometry: label-free tissue characterization obtained from high-accuracy bioanalytical imaging. Angew Chem Int Ed Engl, 49(22):3834-8(2010)

Fig. S2: Single ion images of compounds shown in Fig. 1A-B : (upper left to lower right) m/z = 743.5482 (unknown), m/z = 741.5307 (SM (16:0), [M+K]+), m/z = 798.5410 (PC (34:1), [M+K]+), m/z = 616.1767 (heme b, M+), m/z = 772.5253 (PC (32:0), [M+K]+).

Stability of determined mass values was in the range of +/- 1 ppm over 22 hours of measurement (Fig. S4), with a standard deviation of 0.56 ppm. Accuracy data were obtained during tissue scanning experiments by monitoring the mass signal at nominal mass 798. The internal lock mass function of the Orbitrap instrument was used for automatic calibration during imaging measurements, using the known matrix-related ion signals at m/z = 137.0233, m/z = 444.0925 and m/z = 716.1246.

Lamivudine-triphosphate

Formula: C8H14N3O12P3S (468.9511)
Adducts: [M+NH4]+ (Ppm: 9.8)
Mus musculus (Left upper arm)
357_l_total ion count
Resolution: 50μm, 97x131

Description

Diseased

1,1,2,2-Tetrahydroperfluoro-1-decanol

Formula: C10H5F17O (464.0069)
Adducts: [M+Na]+ (Ppm: 13.7)
Mus musculus (Lung)
image4
Resolution: 40μm, 162x156

Description

Fig 6c Fig. 6 MALDI-MSI of U13C-PC16:0/16:0 acyl chain remodeling. A: Averaged MALDI mass spectrum from lung tissue collected from mice euthanized 12 h after administration of D9-choline and U13C-DPPC–containing Poractant alfa surfactant. The ion at m/z 828.6321 is assigned as the [M+Na]+ ion of 13C24-PC16:0_20:4 formed by acyl remodeling of U13C-PC16:0/16:0. The “NL” value refers to the intensity of the base peak in the full range MS1 spectrum. B: MS/MS spectrum of precursor ions at m/z 828.5 ± 0.5 with fragment ions originating from [13C24-PC16:0_20:4+Na]+ annotated. Part-per-million (ppm) mass errors are provided in parentheses. C, D: MALDI-MSI data of [U13C-DPPC+Na]+ (blue), [PC36:4+Na]+ (green) and [13C24-PC16:0_20:4+Na]+ (red) in lung tissue collected from mice (C) 12 h and (D) 18 h after label administration. All images were visualized using total-ion-current normalization and hotspot removal (high quantile = 99%). MS/MS, tandem mass spectrometry; MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

1,1,2,2-Tetrahydroperfluoro-1-decanol

Formula: C10H5F17O (464.0069)
Adducts: [M+Na]+ (Ppm: 15.2)
Mus musculus (Lung)
image2
Resolution: 40μm, 550x256

Description

Supplementary Figure S6. Ion distribution images for (a) [PC36:4+Na]+ (m/z 804.5514) and (b) [PC38:6+Na]+ (m/z 828.5515) obtained from mouse lung tissue collected 6 h after administration of D9- choline and U13C-DPPC–containing CHF5633. Parts-per-million (ppm) mass errors are indicated in parentheses. (c) Magnification of the boxed region in (a) with selected bronchiolar regions outlined in white boxes. (d) The corresponding H&E-stained tissue section with the same selected bronchiolar regions outlined in black boxes. These data demonstrate the co-localisation of the polyunsaturated lipids PC36:4 and PC38:6 with the bronchiolar regions of the lung. All MSI images were visualised using total ion current normalisation and hotspot removal (high quantile = 99%).

Lamivudine-triphosphate

Formula: C8H14N3O12P3S (468.9511)
Adducts: [M+NH4]+ (Ppm: 4.2)
Mytilus edulis (mantle)
20190216_MS38_Mytilus_mantle_350-1500_DHB_pos_A26_10um_275x210
Resolution: 10μm, 275x210

Description