在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 7 Reference Ions Near m/z 465.3087
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000043317 Reliable 465.3053 465.305 ~ 465.3056
MzDiff: 2.5 ppm
Glycocholic acid (BioDeep_00000000126)
Formula: C26H43NO6 (465.309)
6.45 (100%) Homo sapiens
[UBERON:0001043] esophagus
MSI_000046880 Reliable 465.3053 465.305 ~ 465.3056
MzDiff: 2.5 ppm
Glycocholic acid (BioDeep_00000000126)
Formula: C26H43NO6 (465.309)
5.53 (100%) Homo sapiens
[UBERON:0001043] esophagus
MSI_000065135 Reliable 465.3176 465.3174 ~ 465.3179
MzDiff: 2.1 ppm
Adouetine X (BioDeep_00000019570)
Formula: C28H44N4O4 (500.3362)
5.87 (100%) Homo sapiens
[UBERON:0001155] colon
MSI_000043232 Unreliable 465.3178 465.3177 ~ 465.318
MzDiff: 0.9 ppm
Adouetine X (BioDeep_00000019570)
Formula: C28H44N4O4 (500.3362)
6.13 (100%) Homo sapiens
[UBERON:0001043] esophagus
MSI_000047748 Unreliable 465.3169 465.3169 ~ 465.3169
MzDiff: none
Ecdysone (BioDeep_00000178603)
Formula: C27H44O6 (464.3138)
2.13 (100%) Homo sapiens
[UBERON:0013067] colorectal mucosa
MSI_000065522 Unreliable 465.3039 465.3039 ~ 465.304
MzDiff: 0.4 ppm
Glycocholic acid (BioDeep_00000000126)
Formula: C26H43NO6 (465.309)
2.62 (100%) Homo sapiens
[UBERON:0001155] colon
MSI_000056359 Unavailable 465.3056 465.3056 ~ 465.3056
MzDiff: none
Glycocholic acid (BioDeep_00000000126)
Formula: C26H43NO6 (465.309)
-0.79 (100%) Homo sapiens
[UBERON:0007779] transudate

Found 13 Sample Hits
Metabolite Species Sample
Glycocholic acid

Formula: C26H43NO6 (465.309)
Adducts: [M]+ (Ppm: 6.2)
Homo sapiens (esophagus)
LNTO22_1_9
Resolution: 75μm, 89x74

Description

Glycocholic acid

Formula: C26H43NO6 (465.309)
Adducts: [M]+ (Ppm: 19)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

Glycocholic acid

Formula: C26H43NO6 (465.309)
Adducts: [M]+ (Ppm: 0.5)
Homo sapiens (colorectal adenocarcinoma)
80TopL, 50TopR, 70BottomL, 60BottomR-profile
Resolution: 17μm, 137x136

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).

Glycocholic acid

Formula: C26H43NO6 (465.309)
Adducts: [M]+ (Ppm: 8.1)
Homo sapiens (colorectal adenocarcinoma)
520TopL, 490TopR, 510BottomL, 500BottomR-profile
Resolution: 17μm, 147x131

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).

Glycocholic acid

Formula: C26H43NO6 (465.309)
Adducts: [M]+ (Ppm: 4.2)
Homo sapiens (colorectal adenocarcinoma)
439TopL, 409TopR, 429BottomL, 419BottomR-profile
Resolution: 17μm, 157x136

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).

Glycocholic acid

Formula: C26H43NO6 (465.309)
Adducts: [M]+ (Ppm: 14.8)
Homo sapiens (NA)
160TopL,130TopR,150BottomL,140BottomR-profile
Resolution: 17μm, 142x136

Description

1-(6-((3-Methoxyestra-1,3,5(10)-trien-17-yl)amino)hexyl)-1H-pyrrole-2,5-dione

Formula: C29H40N2O3 (464.3039)
Adducts: [M+H]+ (Ppm: 0.7)
Homo sapiens (NA)
160TopL,130TopR,150BottomL,140BottomR-profile
Resolution: 17μm, 142x136

Description

Glycocholic acid

Formula: C26H43NO6 (465.309)
Adducts: [M]+ (Ppm: 6.2)
Homo sapiens (esophagus)
LNTO26_7_2
Resolution: 17μm, 135x101

Description

Glycocholic acid

Formula: C26H43NO6 (465.309)
Adducts: [M]+ (Ppm: 7.9)
Homo sapiens (esophagus)
LNTO30_8M_4
Resolution: 75μm, 62x48

Description

Glycocholic acid

Formula: C26H43NO6 (465.309)
Adducts: [M]+ (Ppm: 7)
Homo sapiens (esophagus)
LNTO22_1_7
Resolution: 75μm, 69x54

Description

Glycocholic acid

Formula: C26H43NO6 (465.309)
Adducts: [M]+ (Ppm: 7.7)
Homo sapiens (esophagus)
LNTO22_1_8
Resolution: 75μm, 69x61

Description

Glycocholic acid

Formula: C26H43NO6 (465.309)
Adducts: [M]+ (Ppm: 7.7)
Homo sapiens (esophagus)
LNTO22_2_1
Resolution: 75μm, 89x88

Description

Glycocholic acid

Formula: C26H43NO6 (465.309)
Adducts: [M]+ (Ppm: 7.2)
Homo sapiens (esophagus)
LNTO26_16_1
Resolution: 75μm, 95x88

Description