在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 12 Reference Ions Near m/z 365.0967
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000018093 Reliable 365.1055 365.1055 ~ 365.1055
MzDiff: 0.2 ppm
Sucrose (BioDeep_00000000099)
Formula: C12H22O11 (342.1162)
0.49 (100%) Vitis vinifera
[PO:0009087] mesocarp
MSI_000015943 Unreliable 365.0937 365.0936 ~ 365.0938
MzDiff: 0.6 ppm
Adenosine monophosphate (BioDeep_00000001261)
Formula: C10H14N5O7P (347.0631)
2.97 (100%) Vitis vinifera
[PO:0009085] exocarp
MSI_000016444 Unreliable 365.1055 365.1055 ~ 365.1055
MzDiff: 0.1 ppm
Sucrose (BioDeep_00000000099)
Formula: C12H22O11 (342.1162)
0.97 (100%) Vitis vinifera
[PO:0009086] endocarp
MSI_000013094 Unavailable 365.1054 365.1054 ~ 365.1054
MzDiff: none
Sucrose (BioDeep_00000000099)
Formula: C12H22O11 (342.1162)
-0.7 (100%) Plant
[PO:0005020] vascular bundle
MSI_000013367 Unreliable 365.1054 365.1054 ~ 365.1054
MzDiff: none
Sucrose (BioDeep_00000000099)
Formula: C12H22O11 (342.1162)
1.36 (100%) Plant
[PO:0005417] phloem
MSI_000016712 Unreliable 365.0938 365.0938 ~ 365.0938
MzDiff: none
Adenosine monophosphate (BioDeep_00000001261)
Formula: C10H14N5O7P (347.0631)
0.18 (100%) Vitis vinifera
[PO:0009086] endocarp
MSI_000018950 Unreliable 365.1054 365.1054 ~ 365.1054
MzDiff: none
Sucrose (BioDeep_00000000099)
Formula: C12H22O11 (342.1162)
0.35 (100%) Plant
[PO:0020124] root stele
MSI_000019593 Unreliable 365.1054 365.1054 ~ 365.1054
MzDiff: none
Sucrose (BioDeep_00000000099)
Formula: C12H22O11 (342.1162)
0.22 (100%) Plant
[PO:0025197] stele
MSI_000032449 Unreliable 365.105 365.105 ~ 365.105
MzDiff: none
Sucrose (BioDeep_00000000099)
Formula: C12H22O11 (342.1162)
1.35 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000033769 Unreliable 365.105 365.105 ~ 365.105
MzDiff: none
Sucrose (BioDeep_00000000099)
Formula: C12H22O11 (342.1162)
0.67 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000035197 Unreliable 365.105 365.105 ~ 365.105
MzDiff: none
Sucrose (BioDeep_00000000099)
Formula: C12H22O11 (342.1162)
1.21 (100%) Posidonia oceanica
[PO:0006203] pericycle
MSI_000037514 Unreliable 365.1053 365.1053 ~ 365.1053
MzDiff: none
Sucrose (BioDeep_00000000099)
Formula: C12H22O11 (342.1162)
1.35 (100%) Posidonia oceanica
[UBERON:0000329] hair root

Found 3 Sample Hits
Metabolite Species Sample
Sulfometuron-methyl

Formula: C15H16N4O5S (364.0841)
Adducts: [M+H]+ (Ppm: 12.9)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

Sucrose

Formula: C12H22O11 (342.1162)
Adducts: [M+Na]+ (Ppm: 0.5)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

Adenosine monophosphate

Formula: C10H14N5O7P (347.0631)
Adducts: [M+NH4]+ (Ppm: 0.6)
Mytilus edulis (mantle)
20190201_MS38_Crassostrea_Mantle_350-1500_DHB_pos_A28_10um_270x210
Resolution: 10μm, 270x210

Description