在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 5 Reference Ions Near m/z 351.154
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000015527 Reliable 351.147 351.147 ~ 351.147
MzDiff: 0.1 ppm
Methylsyringin (BioDeep_00000023118)
Formula: C18H26O9 (386.1577)
4.41 (100%) Vitis vinifera
[PO:0009085] exocarp
MSI_000032710 Unreliable 351.1463 351.1463 ~ 351.1463
MzDiff: none
Methylsyringin (BioDeep_00000023118)
Formula: C18H26O9 (386.1577)
0.48 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000033538 Unreliable 351.1463 351.1463 ~ 351.1463
MzDiff: none
Methylsyringin (BioDeep_00000023118)
Formula: C18H26O9 (386.1577)
1.77 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000035930 Unavailable 351.1463 351.1463 ~ 351.1463
MzDiff: none
Methylsyringin (BioDeep_00000023118)
Formula: C18H26O9 (386.1577)
-0.39 (100%) Posidonia oceanica
[PO:0006203] pericycle
MSI_000037167 Unreliable 351.1467 351.1467 ~ 351.1467
MzDiff: none
Methylsyringin (BioDeep_00000023118)
Formula: C18H26O9 (386.1577)
2.03 (100%) Posidonia oceanica
[UBERON:0000329] hair root

Found 4 Sample Hits
Metabolite Species Sample
Methylsyringin

Formula: C18H26O9 (386.1577)
Adducts: [M+H-2H2O]+ (Ppm: 9.1)
Vitis vinifera (Fruit)
grape_dhb_163_1
Resolution: 17μm, 132x115

Description

Grape berries fruit, condition: Late

Tazarotene

Formula: C21H21NO2S (351.1293)
Adducts: [M-H2O+NH4]+ (Ppm: 6.1)
Mus musculus (Lung)
image2
Resolution: 40μm, 550x256

Description

Supplementary Figure S6. Ion distribution images for (a) [PC36:4+Na]+ (m/z 804.5514) and (b) [PC38:6+Na]+ (m/z 828.5515) obtained from mouse lung tissue collected 6 h after administration of D9- choline and U13C-DPPC–containing CHF5633. Parts-per-million (ppm) mass errors are indicated in parentheses. (c) Magnification of the boxed region in (a) with selected bronchiolar regions outlined in white boxes. (d) The corresponding H&E-stained tissue section with the same selected bronchiolar regions outlined in black boxes. These data demonstrate the co-localisation of the polyunsaturated lipids PC36:4 and PC38:6 with the bronchiolar regions of the lung. All MSI images were visualised using total ion current normalisation and hotspot removal (high quantile = 99%).

Dehydroepiandrosterone sulfate

Formula: C19H28O5S (368.1657)
Adducts: [M+H-H2O]+ (Ppm: 15.5)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

Tazarotene

Formula: C21H21NO2S (351.1293)
Adducts: [M-H2O+NH4]+ (Ppm: 4.1)
Homo sapiens (esophagus)
LNTO22_1_8
Resolution: 75μm, 69x61

Description