在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 7 Reference Ions Near m/z 347.0888
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000017376 Reliable 347.0948 347.0948 ~ 347.0948
MzDiff: 0.2 ppm
Gerberinol (BioDeep_00000026563)
Formula: C21H16O6 (364.0947)
2.6 (100%) Vitis vinifera
[PO:0009087] mesocarp
MSI_000016451 Unreliable 347.0948 347.0948 ~ 347.0948
MzDiff: 0.0 ppm
Gerberinol (BioDeep_00000026563)
Formula: C21H16O6 (364.0947)
0.96 (100%) Vitis vinifera
[PO:0009086] endocarp
MSI_000013467 Unreliable 347.0888 347.0888 ~ 347.0888
MzDiff: none
Adenosine monophosphate (BioDeep_00000001261)
Formula: C10H14N5O7P (347.0631)
1.07 (100%) Plant
[PO:0005417] phloem
MSI_000015130 Unavailable 347.0888 347.0888 ~ 347.0888
MzDiff: none
Adenosine monophosphate (BioDeep_00000001261)
Formula: C10H14N5O7P (347.0631)
-0.58 (100%) Plant
[PO:0006036] root epidermis
MSI_000018861 Unreliable 347.0888 347.0888 ~ 347.0888
MzDiff: none
Adenosine monophosphate (BioDeep_00000001261)
Formula: C10H14N5O7P (347.0631)
1.05 (100%) Plant
[PO:0020124] root stele
MSI_000019816 Unavailable 347.0888 347.0888 ~ 347.0888
MzDiff: none
Adenosine monophosphate (BioDeep_00000001261)
Formula: C10H14N5O7P (347.0631)
-0.45 (100%) Plant
[PO:0025197] stele
MSI_000033362 Unreliable 347.0922 347.0922 ~ 347.0922
MzDiff: none
Cyclic adenosine monophosphate (BioDeep_00002053052)
Formula: C10H12N5O6P (329.0525)
2.18 (100%) Posidonia oceanica
[PO:0005352] xylem

Found 5 Sample Hits
Metabolite Species Sample
Adenosine monophosphate

Formula: C10H14N5O7P (347.0631)
Adducts: [M-H2O+NH4]+ (Ppm: 7.1)
Plant (Root)
MPIMM_035_QE_P_PO_6pm
Resolution: 30μm, 165x170

Description

Adenosine monophosphate

Formula: C10H14N5O7P (347.0631)
Adducts: [M-H2O+NH4]+ (Ppm: 14)
Homo sapiens (Liver)
20171107_FIT4_DHBpos_p70_s50
Resolution: 50μm, 70x70

Description

Gerberinol

Formula: C21H16O6 (364.0947)
Adducts: [M+H-H2O]+ (Ppm: 1.7)
Posidonia oceanica (root)
20190613_MS1_A19r-18
Resolution: 17μm, 246x264

Description

Cyclic adenosine monophosphate

Formula: C10H12N5O6P (329.0525)
Adducts: [M+NH4]+ (Ppm: 19.5)
Posidonia oceanica (root)
MS1_20180404_PO_1200
Resolution: 17μm, 193x208

Description

Adenosine monophosphate

Formula: C10H14N5O7P (347.0631)
Adducts: [M-H2O+NH4]+ (Ppm: 2.7)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.