在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 8 Reference Ions Near m/z 329.2058
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000046262 Reliable 329.2088 329.2088 ~ 329.2088
MzDiff: none
Corticosterone (BioDeep_00000001311)
Formula: C21H30O4 (346.2144)
5.43 (100%) Mus musculus
[UBERON:0002107] liver
MSI_000058275 Reliable 329.2012 329.2011 ~ 329.2013
MzDiff: 0.8 ppm
8-O-Methyloblongine (BioDeep_00000027376)
Formula: C20H26NO3+ (328.1913)
3.45 (100%) DESI
[NOVOCELL:BACKGROUND] blank
MSI_000043804 Unreliable 329.2128 329.2128 ~ 329.2128
MzDiff: none
Corticosterone (BioDeep_00000001311)
Formula: C21H30O4 (346.2144)
1.29 (100%) Homo sapiens
[UBERON:0001043] esophagus
MSI_000061394 Unavailable 329.2094 329.2092 ~ 329.2099
MzDiff: 3.1 ppm
Corticosterone (BioDeep_00000001311)
Formula: C21H30O4 (346.2144)
-0.02 (100%) Mus musculus
[UBERON:0000956] cerebral cortex
MSI_000061036 Unreliable 329.2057 329.2057 ~ 329.2058
MzDiff: 0.3 ppm
5-(Biotinamido)pentylamine (BioDeep_00000174642)
Formula: C15H28N4O2S (328.1933)
4.23 (100%) Mus musculus
[UBERON:0002421] hippocampal formation
MSI_000062675 Unreliable 329.2096 329.2092 ~ 329.2099
MzDiff: 3.1 ppm
Corticosterone (BioDeep_00000001311)
Formula: C21H30O4 (346.2144)
1.27 (100%) Mus musculus
[UBERON:0002421] hippocampal formation
MSI_000058851 Unavailable 329.2066 329.2066 ~ 329.2066
MzDiff: none
Corticosterone (BioDeep_00000001311)
Formula: C21H30O4 (346.2144)
-0.12 (100%) Mus musculus
[UBERON:0001950] neocortex
MSI_000059632 Unreliable 329.2066 329.2066 ~ 329.2066
MzDiff: none
Corticosterone (BioDeep_00000001311)
Formula: C21H30O4 (346.2144)
1.05 (100%) Mus musculus
[UBERON:0002298] brainstem

Found 7 Sample Hits
Metabolite Species Sample
Tetrahydrocortisone

Formula: C21H32O5 (364.225)
Adducts: [M+H-2H2O]+ (Ppm: 18.9)
Marker Pen (NA)
3ul_0.8Mpa_RAW_20241016-PAPER PNMK
Resolution: 30μm, 315x42

Description

By writing the four English letters “PNMK” on white paper with a marker pen, and then scanning with a DESI ion source to obtain the scanning result. The signal of the chemical substances on the marker pen used appears on the channel with an m/z value of 322.1918, 323.1953, 546.4010, and etc, from the single cell deconvolution sampling layer class_4. This test data was tested by chuxiaoping from PANOMIX’s R&D laboratory.

Corticosterone

Formula: C21H30O4 (346.2144)
Adducts: [M+H-H2O]+ (Ppm: 7)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

8-O-Methyloblongine

Formula: C20H26NO3+ (328.1913)
Adducts: [M+H]+ (Ppm: 8.1)
Homo sapiens (esophagus)
LNTO30_7_1
Resolution: 75μm, 69x68

Description

Corticosterone

Formula: C21H30O4 (346.2144)
Adducts: [M+H-H2O]+ (Ppm: 13.7)
Mus musculus (brain)
Brain01_Bregma-3-88b_centroid
Resolution: 17μm, 265x320

Description

5-(Biotinamido)pentylamine

Formula: C15H28N4O2S (328.1933)
Adducts: [M+H]+ (Ppm: 15.9)
Mus musculus (brain)
Brain02_Bregma1-42_03
Resolution: 17μm, 483x403

Description

5-(Biotinamido)pentylamine

Formula: C15H28N4O2S (328.1933)
Adducts: [M+H]+ (Ppm: 15.6)
Mus musculus (brain)
Brain02_Bregma-3-88
Resolution: 17μm, 288x282

Description

5-(Biotinamido)pentylamine

Formula: C15H28N4O2S (328.1933)
Adducts: [M+H]+ (Ppm: 15.6)
Mus musculus (brain)
Brain02_Bregma-1-46
Resolution: 17μm, 294x399

Description