在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 15 Reference Ions Near m/z 329.0136
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000054446 Reliable 329.0054 329.0051 ~ 329.0057
MzDiff: 2.4 ppm
5,7,11,19-tetraoxapentacyclo[10.8.0.0²,¹⁰.0⁴,⁸.0¹³,¹⁸]icosa-2,4(8),9,13,15,17-hexaen-16-yloxidanesulfonic acid (BioDeep_00002141300)
Formula: C16H12O8S (364.0253)
2.42 (67%) MALDI - CHCA
[NOVOCELL:BACKGROUND] blank
MSI_000015500 Reliable 329.0062 329.0061 ~ 329.0063
MzDiff: 1.1 ppm
iodinated analogue of makaluvamine Q (BioDeep_00000409059)
Formula: [C11H11IN3O]+ (327.9947)
4.63 (100%) Vitis vinifera
[PO:0009085] exocarp
MSI_000016831 Unavailable 329.0062 329.0061 ~ 329.0063
MzDiff: 1.1 ppm
iodinated analogue of makaluvamine Q (BioDeep_00000409059)
Formula: [C11H11IN3O]+ (327.9947)
-0.08 (100%) Vitis vinifera
[PO:0009086] endocarp
MSI_000013304 Unavailable 329.0051 329.0051 ~ 329.0051
MzDiff: none
6-Thioinosine-5'-monophosphate (BioDeep_00000003333)
Formula: C10H13N4O7PS (364.0243)
-0.95 (100%) Plant
[PO:0005020] vascular bundle
MSI_000013499 Unreliable 329.0051 329.0051 ~ 329.0051
MzDiff: none
6-Thioinosine-5'-monophosphate (BioDeep_00000003333)
Formula: C10H13N4O7PS (364.0243)
0.96 (100%) Plant
[PO:0005417] phloem
MSI_000013560 Unreliable 329.0136 329.0136 ~ 329.0136
MzDiff: none
Fertilysin (BioDeep_00000172864)
Formula: C12H20Cl4N2O2 (364.0279)
0.77 (100%) Plant
[PO:0005417] phloem
MSI_000014685 Unavailable 329.0136 329.0136 ~ 329.0136
MzDiff: none
Fertilysin (BioDeep_00000172864)
Formula: C12H20Cl4N2O2 (364.0279)
-0.11 (100%) Plant
[PO:0006036] root epidermis
MSI_000018842 Unreliable 329.0051 329.0051 ~ 329.0051
MzDiff: none
6-Thioinosine-5'-monophosphate (BioDeep_00000003333)
Formula: C10H13N4O7PS (364.0243)
1.17 (100%) Plant
[PO:0020124] root stele
MSI_000019099 Unavailable 329.0136 329.0136 ~ 329.0136
MzDiff: none
Fertilysin (BioDeep_00000172864)
Formula: C12H20Cl4N2O2 (364.0279)
-0.86 (100%) Plant
[PO:0020124] root stele
MSI_000019227 Unreliable 329.0136 329.0136 ~ 329.0136
MzDiff: none
Fertilysin (BioDeep_00000172864)
Formula: C12H20Cl4N2O2 (364.0279)
1.25 (100%) Plant
[PO:0025197] stele
MSI_000019741 Unavailable 329.0051 329.0051 ~ 329.0051
MzDiff: none
6-Thioinosine-5'-monophosphate (BioDeep_00000003333)
Formula: C10H13N4O7PS (364.0243)
-0.32 (100%) Plant
[PO:0025197] stele
MSI_000032700 Unreliable 329.0051 329.0051 ~ 329.0051
MzDiff: none
iodinated analogue of makaluvamine Q (BioDeep_00000409059)
Formula: [C11H11IN3O]+ (327.9947)
0.52 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000033653 Unreliable 329.0051 329.0051 ~ 329.0051
MzDiff: none
iodinated analogue of makaluvamine Q (BioDeep_00000409059)
Formula: [C11H11IN3O]+ (327.9947)
1.15 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000035787 Unavailable 329.0051 329.0051 ~ 329.0051
MzDiff: none
iodinated analogue of makaluvamine Q (BioDeep_00000409059)
Formula: [C11H11IN3O]+ (327.9947)
-0.35 (100%) Posidonia oceanica
[PO:0006203] pericycle
MSI_000037446 Unreliable 329.0053 329.0053 ~ 329.0053
MzDiff: none
5,7,11,19-tetraoxapentacyclo[10.8.0.0²,¹⁰.0⁴,⁸.0¹³,¹⁸]icosa-2,4(8),9,13,15,17-hexaen-16-yloxidanesulfonic acid (BioDeep_00002141300)
Formula: C16H12O8S (364.0253)
1.73 (100%) Posidonia oceanica
[UBERON:0000329] hair root

Found 4 Sample Hits
Metabolite Species Sample
6-Thioinosine-5'-monophosphate

Formula: C10H13N4O7PS (364.0243)
Adducts: [M+H-2H2O]+ (Ppm: 15.2)
Marker Pen (NA)
3ul_0.8Mpa_RAW_20241016-PAPER PNMK
Resolution: 30μm, 315x42

Description

By writing the four English letters “PNMK” on white paper with a marker pen, and then scanning with a DESI ion source to obtain the scanning result. The signal of the chemical substances on the marker pen used appears on the channel with an m/z value of 322.1918, 323.1953, 546.4010, and etc, from the single cell deconvolution sampling layer class_4. This test data was tested by chuxiaoping from PANOMIX’s R&D laboratory.

Fertilysin

Formula: C12H20Cl4N2O2 (364.0279)
Adducts: [M+H-2H2O]+ (Ppm: 1.3)
Plant (Root)
MPIMM_035_QE_P_PO_6pm
Resolution: 30μm, 165x170

Description

5,7,11,19-tetraoxapentacyclo[10.8.0.0²,¹⁰.0⁴,⁸.0¹³,¹⁸]icosa-2,4(8),9,13,15,17-hexaen-16-yloxidanesulfonic acid

Formula: C16H12O8S (364.0253)
Adducts: [M+H-2H2O]+ (Ppm: 17.4)
Posidonia oceanica (root)
20190613_MS1_A19r-18
Resolution: 17μm, 246x264

Description

6-Thioinosine-5'-monophosphate

Formula: C10H13N4O7PS (364.0243)
Adducts: [M+H-2H2O]+ (Ppm: 15.8)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.