在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 5 Reference Ions Near m/z 310.9682
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000013498 Unreliable 310.9719 310.9719 ~ 310.9719
MzDiff: none
Pentafluoropropionic anhydride (BioDeep_00000182211)
Formula: C6F10O3 (309.9688)
0.96 (100%) Plant
[PO:0005417] phloem
MSI_000014669 Unavailable 310.9719 310.9719 ~ 310.9719
MzDiff: none
Pentafluoropropionic anhydride (BioDeep_00000182211)
Formula: C6F10O3 (309.9688)
-0.04 (100%) Plant
[PO:0006036] root epidermis
MSI_000019114 Unavailable 310.9719 310.9719 ~ 310.9719
MzDiff: none
Pentafluoropropionic anhydride (BioDeep_00000182211)
Formula: C6F10O3 (309.9688)
-0.9 (100%) Plant
[PO:0020124] root stele
MSI_000019287 Unreliable 310.9719 310.9719 ~ 310.9719
MzDiff: none
Pentafluoropropionic anhydride (BioDeep_00000182211)
Formula: C6F10O3 (309.9688)
1.05 (100%) Plant
[PO:0025197] stele
MSI_000032264 Unreliable 310.9716 310.9716 ~ 310.9716
MzDiff: none
Not Annotated 2.04 (0%) Posidonia oceanica
[PO:0005020] vascular bundle

Found 6 Sample Hits
Metabolite Species Sample
Pentafluoropropionic anhydride

Formula: C6F10O3 (309.9688)
Adducts: [M+H]+ (Ppm: 13.4)
Plant (Root)
MPIMM_035_QE_P_PO_6pm
Resolution: 30μm, 165x170

Description

m/z_310.9722

Formula: - (n/a)
Adducts: (Ppm: 0)
Posidonia oceanica (root)
20190613_MS1_A19r-18
Resolution: 17μm, 246x264

Description

m/z_310.9621

Formula: - (n/a)
Adducts: (Ppm: 0)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

Pentafluoropropionic anhydride

Formula: C6F10O3 (309.9688)
Adducts: [M+H]+ (Ppm: 5)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

Dodecafluoropentane

Formula: C5F12 (287.9808)
Adducts: [M+Na]+ (Ppm: 6)
Homo sapiens (esophagus)
LNTO22_1_9
Resolution: 75μm, 89x74

Description

Dodecafluoropentane

Formula: C5F12 (287.9808)
Adducts: [M+Na]+ (Ppm: 7.3)
Homo sapiens (esophagus)
LNTO22_1_7
Resolution: 75μm, 69x54

Description