在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 8 Reference Ions Near m/z 281.9997
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000032569 Unreliable 281.9924 281.992 ~ 281.9926
MzDiff: 2.4 ppm
(2r)-1-chloro-4-{5'-methyl-[2,2'-bithiophen]-5-yl}but-3-yn-2-ol (BioDeep_00002142936)
Formula: C13H11ClOS2 (281.994)
1.84 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000013049 Unavailable 281.9925 281.9925 ~ 281.9925
MzDiff: none
Azinphos-methyl (BioDeep_00000002394)
Formula: C10H12N3O3PS2 (317.0058)
-0.64 (100%) Plant
[PO:0005020] vascular bundle
MSI_000013812 Unreliable 281.9925 281.9925 ~ 281.9925
MzDiff: none
Azinphos-methyl (BioDeep_00000002394)
Formula: C10H12N3O3PS2 (317.0058)
0.09 (100%) Plant
[PO:0005417] phloem
MSI_000015204 Unavailable 281.9925 281.9925 ~ 281.9925
MzDiff: none
Azinphos-methyl (BioDeep_00000002394)
Formula: C10H12N3O3PS2 (317.0058)
-0.62 (100%) Plant
[PO:0006036] root epidermis
MSI_000018600 Unreliable 281.9925 281.9925 ~ 281.9925
MzDiff: none
Azinphos-methyl (BioDeep_00000002394)
Formula: C10H12N3O3PS2 (317.0058)
1.71 (100%) Plant
[PO:0020124] root stele
MSI_000020148 Unavailable 281.9925 281.9925 ~ 281.9925
MzDiff: none
Azinphos-methyl (BioDeep_00000002394)
Formula: C10H12N3O3PS2 (317.0058)
-0.54 (100%) Plant
[PO:0025197] stele
MSI_000033822 Unreliable 281.992 281.992 ~ 281.992
MzDiff: none
(2r)-1-chloro-4-{5'-methyl-[2,2'-bithiophen]-5-yl}but-3-yn-2-ol (BioDeep_00002142936)
Formula: C13H11ClOS2 (281.994)
0.48 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000040281 Unavailable 281.9925 281.9925 ~ 281.9925
MzDiff: none
(2r)-1-chloro-4-{5'-methyl-[2,2'-bithiophen]-5-yl}but-3-yn-2-ol (BioDeep_00002142936)
Formula: C13H11ClOS2 (281.994)
-0.13 (100%) Posidonia oceanica
[PO:0005417] phloem

Found 2 Sample Hits
Metabolite Species Sample
(2r)-1-chloro-4-{5'-methyl-[2,2'-bithiophen]-5-yl}but-3-yn-2-ol

Formula: C13H11ClOS2 (281.994)
Adducts: [M]+ (Ppm: 3.3)
Posidonia oceanica (root)
MS1_20180404_PO_1200
Resolution: 17μm, 193x208

Description

3-Iodo-2-propynyl butylcarbamate

Formula: C8H12INO2 (280.9913)
Adducts: [M+H]+ (Ppm: 4.1)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.