在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 11 Reference Ions Near m/z 211.0432
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000052717 Reliable 211.0432 211.043 ~ 211.0437
MzDiff: 2.8 ppm
Glucaric acid (BioDeep_00000001735)
Formula: C6H10O8 (210.0376)
15.4 (100%) DESI
[NOVOCELL:BACKGROUND] blank
MSI_000053661 Reliable 211.0363 211.0363 ~ 211.0364
MzDiff: 0.8 ppm
Isopimpinellin (BioDeep_00000000214)
Formula: C13H10O5 (246.0528)
6.13 (100%) MALDI - CHCA
[NOVOCELL:BACKGROUND] blank
MSI_000012825 Unavailable 211.037 211.037 ~ 211.037
MzDiff: none
Phosphocreatine (BioDeep_00000002691)
Formula: C4H10N3O5P (211.0358)
-0.48 (100%) Plant
[PO:0005020] vascular bundle
MSI_000014110 Unavailable 211.037 211.037 ~ 211.037
MzDiff: none
Phosphocreatine (BioDeep_00000002691)
Formula: C4H10N3O5P (211.0358)
-0.32 (100%) Plant
[PO:0005417] phloem
MSI_000014922 Unavailable 211.037 211.037 ~ 211.037
MzDiff: none
Phosphocreatine (BioDeep_00000002691)
Formula: C4H10N3O5P (211.0358)
-0.49 (100%) Plant
[PO:0006036] root epidermis
MSI_000018316 Unreliable 211.037 211.037 ~ 211.037
MzDiff: none
Phosphocreatine (BioDeep_00000002691)
Formula: C4H10N3O5P (211.0358)
1.78 (100%) Plant
[PO:0020124] root stele
MSI_000019921 Unavailable 211.037 211.037 ~ 211.037
MzDiff: none
Phosphocreatine (BioDeep_00000002691)
Formula: C4H10N3O5P (211.0358)
-0.49 (100%) Plant
[PO:0025197] stele
MSI_000033005 Unavailable 211.0363 211.0363 ~ 211.0363
MzDiff: none
Isopimpinellin (BioDeep_00000000214)
Formula: C13H10O5 (246.0528)
-0.16 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000033933 Unreliable 211.0363 211.0363 ~ 211.0363
MzDiff: none
Isopimpinellin (BioDeep_00000000214)
Formula: C13H10O5 (246.0528)
0.23 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000037770 Unreliable 211.0363 211.0363 ~ 211.0363
MzDiff: none
Isopimpinellin (BioDeep_00000000214)
Formula: C13H10O5 (246.0528)
0.2 (100%) Posidonia oceanica
[UBERON:0000329] hair root
MSI_000057697 Unreliable 211.0431 211.0431 ~ 211.0431
MzDiff: none
Glucaric acid (BioDeep_00000001735)
Formula: C6H10O8 (210.0376)
0.65 (100%) Homo sapiens
[UBERON:0007779] transudate

Found 24 Sample Hits
Metabolite Species Sample
Galactaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 13)
Vitis vinifera (Fruit)
grape_dhb_91_1
Resolution: 50μm, 120x114

Description

Grape berries fruit, condition: Ripe

Galactaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 13)
Vitis vinifera (Fruit)
grape_dhb_163_1
Resolution: 17μm, 132x115

Description

Grape berries fruit, condition: Late

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 19.6)
Homo sapiens (esophagus)
LNTO22_1_3
Resolution: 75μm, 121x68

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 8.3)
Homo sapiens (esophagus)
LNTO29_16_2
Resolution: 17μm, 95x101

Description

Phosphocreatine

Formula: C4H10N3O5P (211.0358)
Adducts: [M]+ (Ppm: 8.3)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 8.3)
Homo sapiens (esophagus)
LNTO30_8M_1
Resolution: 17μm, 69x54

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 6.4)
Homo sapiens (colorectal adenocarcinoma)
80TopL, 50TopR, 70BottomL, 60BottomR-profile
Resolution: 17μm, 137x136

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 6.4)
Homo sapiens (colorectal adenocarcinoma)
520TopL, 490TopR, 510BottomL, 500BottomR-profile
Resolution: 17μm, 147x131

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 8.7)
Homo sapiens (esophagus)
LNTO29_16_3
Resolution: 17μm, 108x107

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 9.2)
Homo sapiens (esophagus)
TO40T
Resolution: 17μm, 82x74

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 8.7)
Homo sapiens (esophagus)
TO31T
Resolution: 75μm, 56x54

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 6.8)
Homo sapiens (esophagus)
TO29T
Resolution: 75μm, 56x48

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 8.3)
Homo sapiens (esophagus)
LNTO30_8M_2
Resolution: 75μm, 108x68

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 8.7)
Homo sapiens (esophagus)
LNTO30_8M_3
Resolution: 75μm, 69x54

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 8.3)
Homo sapiens (esophagus)
LNTO30_8M_5
Resolution: 75μm, 56x54

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 7.8)
Homo sapiens (esophagus)
LNTO30_17_2
Resolution: 75μm, 82x54

Description

Euxanthone

Formula: C13H8O4 (228.0423)
Adducts: [M+H-H2O]+ (Ppm: 6.3)
Homo sapiens (esophagus)
LNTO22_1_5
Resolution: 75μm, 135x94

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 16.8)
Homo sapiens (esophagus)
LNTO22_1_8
Resolution: 75μm, 69x61

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 18.7)
Homo sapiens (esophagus)
LNTO22_2_1
Resolution: 75μm, 89x88

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 8.3)
Homo sapiens (esophagus)
LNTO29_18_2
Resolution: 75μm, 62x68

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 8.3)
Homo sapiens (esophagus)
LNTO30_7_1
Resolution: 75μm, 69x68

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 7.8)
Homo sapiens (colorectal adenocarcinoma)
240TopL, 210TopR, 230BottomL, 220BottomR-centroid
Resolution: 50μm, 142x141

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 5.4)
Homo sapiens (colorectal adenocarcinoma)
200TopL, 170TopR, 190BottomL, 180BottomR-centroid
Resolution: 50μm, 132x126

Description

Glucaric acid

Formula: C6H10O8 (210.0376)
Adducts: [M+H]+ (Ppm: 6.8)
Homo sapiens (colorectal adenocarcinoma)
120TopL, 90TopR, 110BottomL, 100BottomR-centroid
Resolution: 50μm, 132x136

Description