在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 9 Reference Ions Near m/z 191.0409
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000053975 Unreliable 191.031 191.0309 ~ 191.031
MzDiff: 0.3 ppm
5,8-Dihydroxy-1,4-naphthoquinone (BioDeep_00000181552)
Formula: C10H6O4 (190.0266)
3.7 (100%) MALDI - CHCA
[NOVOCELL:BACKGROUND] blank
MSI_000012788 Unavailable 191.0311 191.0311 ~ 191.0311
MzDiff: none
4-hydroxymandelic acid (BioDeep_00000001255)
Formula: C8H8O4 (168.0423)
-0.46 (100%) Plant
[PO:0005020] vascular bundle
MSI_000014143 Unavailable 191.0311 191.0311 ~ 191.0311
MzDiff: none
4-hydroxymandelic acid (BioDeep_00000001255)
Formula: C8H8O4 (168.0423)
-0.34 (100%) Plant
[PO:0005417] phloem
MSI_000014908 Unavailable 191.0311 191.0311 ~ 191.0311
MzDiff: none
4-hydroxymandelic acid (BioDeep_00000001255)
Formula: C8H8O4 (168.0423)
-0.49 (100%) Plant
[PO:0006036] root epidermis
MSI_000018280 Unreliable 191.0311 191.0311 ~ 191.0311
MzDiff: none
4-hydroxymandelic acid (BioDeep_00000001255)
Formula: C8H8O4 (168.0423)
1.79 (100%) Plant
[PO:0020124] root stele
MSI_000019904 Unavailable 191.0311 191.0311 ~ 191.0311
MzDiff: none
4-hydroxymandelic acid (BioDeep_00000001255)
Formula: C8H8O4 (168.0423)
-0.49 (100%) Plant
[PO:0025197] stele
MSI_000032238 Unreliable 191.0499 191.0499 ~ 191.0499
MzDiff: none
Anthraquinone (BioDeep_00000004265)
Formula: C14H8O2 (208.0524)
2.12 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000035727 Unavailable 191.031 191.031 ~ 191.031
MzDiff: none
5,8-Dihydroxy-1,4-naphthoquinone (BioDeep_00000181552)
Formula: C10H6O4 (190.0266)
-0.31 (100%) Posidonia oceanica
[PO:0006203] pericycle
MSI_000037516 Unreliable 191.0331 191.0331 ~ 191.0331
MzDiff: none
5,8-Dihydroxy-1,4-naphthoquinone (BioDeep_00000181552)
Formula: C10H6O4 (190.0266)
1.32 (100%) Posidonia oceanica
[UBERON:0000329] hair root

Found 2 Sample Hits
Metabolite Species Sample
4-Nitroquinoline N-oxide

Formula: C9H6N2O3 (190.0378)
Adducts: [M+H]+ (Ppm: 19.5)
Vitis vinifera (Fruit)
grape_dhb_164_1
Resolution: 17μm, 136x122

Description

Grape berries fruit, condition: Late

3-Methyl-5-pentyl-1,2,4-trithiolane

Formula: C8H16S3 (208.0414)
Adducts: [M+H-H2O]+ (Ppm: 14.5)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.