在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 19 Reference Ions Near m/z 184.0671
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000061814 Reliable 184.0729 184.0729 ~ 184.0729
MzDiff: 0.1 ppm
Tryptophol (BioDeep_00000001223)
Formula: C10H11NO (161.0841)
1 (100%) Mus musculus
[UBERON:0000956] cerebral cortex
MSI_000033091 Unreliable 184.0732 184.0732 ~ 184.0732
MzDiff: 0.1 ppm
Tryptophol (BioDeep_00000001223)
Formula: C10H11NO (161.0841)
1.54 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000060931 Unreliable 184.0733 184.0733 ~ 184.0734
MzDiff: 0.5 ppm
4-Fluoro-L-phenylalanine (BioDeep_00000002902)
Formula: C9H10FNO2 (183.0696)
0.46 (100%) Mus musculus
[UBERON:0002421] hippocampal formation
MSI_000032718 Unreliable 184.0733 184.0732 ~ 184.0735
MzDiff: 1.4 ppm
Tryptophol (BioDeep_00000001223)
Formula: C10H11NO (161.0841)
1.83 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000058449 Unreliable 184.0733 184.0733 ~ 184.0733
MzDiff: 0.4 ppm
4-Fluoro-L-phenylalanine (BioDeep_00000002902)
Formula: C9H10FNO2 (183.0696)
1.35 (100%) Mus musculus
[UBERON:0001950] neocortex
MSI_000038975 Unreliable 184.0734 184.0733 ~ 184.0735
MzDiff: 1.2 ppm
Tryptophol (BioDeep_00000001223)
Formula: C10H11NO (161.0841)
1.26 (100%) Posidonia oceanica
[PO:0005059] root endodermis
MSI_000038383 Unreliable 184.0637 184.0637 ~ 184.0637
MzDiff: none
Pyridoxate (BioDeep_00000001121)
Formula: C8H9NO4 (183.0532)
2.24 (100%) Posidonia oceanica
[PO:0005059] root endodermis
MSI_000028689 Unreliable 184.0671 184.0671 ~ 184.0671
MzDiff: none
Choline sulfate (BioDeep_00000014854)
Formula: C5H13NO4S (183.0565)
0.58 (100%) Macropus giganteus
[UBERON:0001891] midbrain
MSI_000030360 Unreliable 184.0671 184.0671 ~ 184.0671
MzDiff: none
Choline sulfate (BioDeep_00000014854)
Formula: C5H13NO4S (183.0565)
1.88 (100%) Macropus giganteus
[UBERON:0003027] cingulate cortex
MSI_000031517 Unreliable 184.0671 184.0671 ~ 184.0671
MzDiff: none
Choline sulfate (BioDeep_00000014854)
Formula: C5H13NO4S (183.0565)
0.51 (100%) Macropus giganteus
[UBERON:0006093] precuneus cortex
MSI_000001294 Unavailable 184.0718 184.0718 ~ 184.0718
MzDiff: none
Tryptophol (BioDeep_00000001223)
Formula: C10H11NO (161.0841)
-0.56 (100%) Mus musculus
[UBERON:0001224] renal pelvis
MSI_000001762 Unavailable 184.0718 184.0718 ~ 184.0718
MzDiff: none
Tryptophol (BioDeep_00000001223)
Formula: C10H11NO (161.0841)
-0.57 (100%) Mus musculus
[UBERON:0001225] cortex of kidney
MSI_000002226 Unavailable 184.0718 184.0718 ~ 184.0718
MzDiff: none
Tryptophol (BioDeep_00000001223)
Formula: C10H11NO (161.0841)
-0.57 (100%) Mus musculus
[UBERON:0001293] outer medulla of kidney
MSI_000037515 Unreliable 184.0731 184.0731 ~ 184.0731
MzDiff: none
Tryptophol (BioDeep_00000001223)
Formula: C10H11NO (161.0841)
1.34 (100%) Posidonia oceanica
[UBERON:0000329] hair root
MSI_000059803 Unavailable 184.0733 184.0733 ~ 184.0733
MzDiff: none
4-Fluoro-L-phenylalanine (BioDeep_00000002902)
Formula: C9H10FNO2 (183.0696)
-0.59 (100%) Mus musculus
[UBERON:0002298] brainstem
MSI_000039883 Unreliable 184.0733 184.0733 ~ 184.0733
MzDiff: none
Tryptophol (BioDeep_00000001223)
Formula: C10H11NO (161.0841)
0.71 (100%) Posidonia oceanica
[PO:0005417] phloem
MSI_000013194 Unavailable 184.0739 184.0739 ~ 184.0739
MzDiff: none
4-Fluoro-L-phenylalanine (BioDeep_00000002902)
Formula: C9H10FNO2 (183.0696)
-0.81 (100%) Plant
[PO:0005020] vascular bundle
MSI_000013554 Unreliable 184.0739 184.0739 ~ 184.0739
MzDiff: none
4-Fluoro-L-phenylalanine (BioDeep_00000002902)
Formula: C9H10FNO2 (183.0696)
0.78 (100%) Plant
[PO:0005417] phloem
MSI_000018797 Unreliable 184.0739 184.0739 ~ 184.0739
MzDiff: none
4-Fluoro-L-phenylalanine (BioDeep_00000002902)
Formula: C9H10FNO2 (183.0696)
1.36 (100%) Plant
[PO:0020124] root stele

Found 4 Sample Hits
Metabolite Species Sample
Choline sulfate

Formula: C5H13NO4S (183.0565)
Adducts: [M+H]+ (Ppm: 17.9)
Macropus giganteus (Brain)
170321_kangaroobrain-dan3-pos_maxof50.0_med1
Resolution: 50μm, 81x50

Description

Sample information Organism: Macropus giganteus (kangaroo) Organism part: Brain Condition: Wildtype Sample growth conditions: Wild

Pyridoxate

Formula: C8H9NO4 (183.0532)
Adducts: [M+H]+ (Ppm: 17.8)
Posidonia oceanica (root)
MS1_20180404_PO_1200
Resolution: 17μm, 193x208

Description

4-Fluoro-L-phenylalanine

Formula: C9H10FNO2 (183.0696)
Adducts: [M+H]+ (Ppm: 15.4)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

4-Fluoro-L-phenylalanine

Formula: C9H10FNO2 (183.0696)
Adducts: [M+H]+ (Ppm: 19.2)
Mus musculus (brain)
Brain01_Bregma-3-88b_centroid
Resolution: 17μm, 265x320

Description