在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 7 Reference Ions Near m/z 175.0484
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000058035 Reliable 175.0396 175.0394 ~ 175.0397
MzDiff: 1.3 ppm
Docosahexaenoic acid (BioDeep_00000017247)
Formula: C8H8O3 (152.0473)
4.9 (100%) DESI
[NOVOCELL:BACKGROUND] blank
MSI_000052834 Reliable 175.0427 175.0424 ~ 175.0428
MzDiff: 1.7 ppm
Ethyl 1-(propylthio)propyl disulfide (BioDeep_00000034450)
Formula: C8H18S3 (210.0571)
4.49 (43%) DESI
[NOVOCELL:BACKGROUND] blank
MSI_000054249 Reliable 175.0386 175.0384 ~ 175.0389
MzDiff: 2.4 ppm
Lawsone (BioDeep_00000180408)
Formula: C10H6O3 (174.0317)
2.99 (100%) MALDI - CHCA
[NOVOCELL:BACKGROUND] blank
MSI_000035378 Unreliable 175.0558 175.0558 ~ 175.0558
MzDiff: none
D-Arabitol (BioDeep_00000014352)
Formula: C5H12O5 (152.0685)
0.32 (100%) Posidonia oceanica
[PO:0006203] pericycle
MSI_000040385 Unavailable 175.0389 175.0389 ~ 175.0389
MzDiff: none
Lawsone (BioDeep_00000180408)
Formula: C10H6O3 (174.0317)
-0.19 (100%) Posidonia oceanica
[PO:0005417] phloem
MSI_000055786 Unreliable 175.0407 175.0407 ~ 175.0407
MzDiff: none
Juglone (BioDeep_00000000449)
Formula: C10H6O3 (174.0317)
0.19 (100%) Homo sapiens
[UBERON:0007779] transudate
MSI_000057490 Unreliable 175.0511 175.0511 ~ 175.0511
MzDiff: none
2-Quinoxalinecarboxylic acid (BioDeep_00000012341)
Formula: C9H6N2O2 (174.0429)
0.92 (100%) Homo sapiens
[UBERON:0007779] transudate

Found 6 Sample Hits
Metabolite Species Sample
Lawsone

Formula: C10H6O3 (174.0317)
Adducts: [M+H]+ (Ppm: 0.7)
Posidonia oceanica (root)
20190613_MS1_A19r-18
Resolution: 17μm, 246x264

Description

Lawsone

Formula: C10H6O3 (174.0317)
Adducts: [M+H]+ (Ppm: 0.4)
Posidonia oceanica (root)
MS1_20180404_PO_1200
Resolution: 17μm, 193x208

Description

2-Quinoxalinecarboxylic acid

Formula: C9H6N2O2 (174.0429)
Adducts: [M+H]+ (Ppm: 5.1)
Homo sapiens (esophagus)
LNTO22_1_4
Resolution: 17μm, 82x80

Description

2-Quinoxalinecarboxylic acid

Formula: C9H6N2O2 (174.0429)
Adducts: [M+H]+ (Ppm: 10.3)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.

Oxonic Acid

Formula: C4H3N3O4 (157.0124)
Adducts: [M+NH4]+ (Ppm: 18.2)
Homo sapiens (esophagus)
LNTO26_7_1
Resolution: 17μm, 75x74

Description

Oxonic Acid

Formula: C4H3N3O4 (157.0124)
Adducts: [M+NH4]+ (Ppm: 17)
Homo sapiens (esophagus)
LNTO26_16_1
Resolution: 75μm, 95x88

Description