在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 11 Reference Ions Near m/z 161.0685
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000053800 Reliable 161.0595 161.0593 ~ 161.0597
MzDiff: 1.4 ppm
Dihydroferulate (BioDeep_00000017611)
Formula: C10H12O4 (196.0736)
4.43 (100%) MALDI - CHCA
[NOVOCELL:BACKGROUND] blank
MSI_000043113 Reliable 161.0622 161.0621 ~ 161.0623
MzDiff: 1.1 ppm
Dihydroferulate (BioDeep_00000017611)
Formula: C10H12O4 (196.0736)
5.78 (100%) Homo sapiens
[UBERON:0001043] esophagus
MSI_000012666 Unavailable 161.0601 161.0601 ~ 161.0601
MzDiff: none
Dihydroferulate (BioDeep_00000017611)
Formula: C10H12O4 (196.0736)
-0.33 (100%) Plant
[PO:0005020] vascular bundle
MSI_000014230 Unavailable 161.0601 161.0601 ~ 161.0601
MzDiff: none
Dihydroferulate (BioDeep_00000017611)
Formula: C10H12O4 (196.0736)
-0.41 (100%) Plant
[PO:0005417] phloem
MSI_000014977 Unavailable 161.0601 161.0601 ~ 161.0601
MzDiff: none
Dihydroferulate (BioDeep_00000017611)
Formula: C10H12O4 (196.0736)
-0.51 (100%) Plant
[PO:0006036] root epidermis
MSI_000018337 Unreliable 161.0601 161.0601 ~ 161.0601
MzDiff: none
Dihydroferulate (BioDeep_00000017611)
Formula: C10H12O4 (196.0736)
1.78 (100%) Plant
[PO:0020124] root stele
MSI_000020114 Unavailable 161.0601 161.0601 ~ 161.0601
MzDiff: none
Dihydroferulate (BioDeep_00000017611)
Formula: C10H12O4 (196.0736)
-0.53 (100%) Plant
[PO:0025197] stele
MSI_000033043 Unavailable 161.0594 161.0594 ~ 161.0594
MzDiff: none
Dihydroferulate (BioDeep_00000017611)
Formula: C10H12O4 (196.0736)
-0.19 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000033502 Unreliable 161.0594 161.0594 ~ 161.0594
MzDiff: none
Dihydroferulate (BioDeep_00000017611)
Formula: C10H12O4 (196.0736)
1.89 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000037217 Unreliable 161.0594 161.0594 ~ 161.0594
MzDiff: none
Dihydroferulate (BioDeep_00000017611)
Formula: C10H12O4 (196.0736)
2.01 (100%) Posidonia oceanica
[UBERON:0000329] hair root
MSI_000039984 Unreliable 161.0596 161.0596 ~ 161.0596
MzDiff: none
Dihydroferulate (BioDeep_00000017611)
Formula: C10H12O4 (196.0736)
0.28 (100%) Posidonia oceanica
[PO:0005417] phloem

Found 2 Sample Hits
Metabolite Species Sample
S-Allylcysteine

Formula: C6H11NO2S (161.051)
Adducts: [M-H2O+NH4]+ (Ppm: 17.4)
Homo sapiens (esophagus)
LNTO22_1_4
Resolution: 17μm, 82x80

Description

Indole-3-carboxylic acid

Formula: C9H7NO2 (161.0477)
Adducts: [M-H2O+NH4]+ (Ppm: 15.1)
Mus musculus (Liver)
Salmonella_final_pos_recal
Resolution: 17μm, 691x430

Description

A more complete and holistic view on host–microbe interactions is needed to understand the physiological and cellular barriers that affect the efficacy of drug treatments and allow the discovery and development of new therapeutics. Here, we developed a multimodal imaging approach combining histopathology with mass spectrometry imaging (MSI) and same section imaging mass cytometry (IMC) to study the effects of Salmonella Typhimurium infection in the liver of a mouse model using the S. Typhimurium strains SL3261 and SL1344. This approach enables correlation of tissue morphology and specific cell phenotypes with molecular images of tissue metabolism. IMC revealed a marked increase in immune cell markers and localization in immune aggregates in infected tissues. A correlative computational method (network analysis) was deployed to find metabolic features associated with infection and revealed metabolic clusters of acetyl carnitines, as well as phosphatidylcholine and phosphatidylethanolamine plasmalogen species, which could be associated with pro-inflammatory immune cell types. By developing an IMC marker for the detection of Salmonella LPS, we were further able to identify and characterize those cell types which contained S. Typhimurium. [dataset] Nicole Strittmatter. Holistic Characterization of a Salmonella Typhimurium Infection Model Using Integrated Molecular Imaging, metabolights_dataset, V1; 2022. https://www.ebi.ac.uk/metabolights/MTBLS2671.