在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 15 Reference Ions Near m/z 946.6005
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000006595 Reliable 946.6004 946.6001 ~ 946.6008
MzDiff: 3.0 ppm
PE(20:1(11Z)/LTE4) (BioDeep_00000186952)
Formula: C48H85N2O11PS (928.5611)
6.21 (53%) Rattus norvegicus
[UBERON:0004358] caput epididymis
MSI_000011668 Unavailable 946.607 946.607 ~ 946.607
MzDiff: none
PI(20:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) (BioDeep_00000201995)
Formula: C49H87O15P (946.5782)
-1.97 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000011675 Unavailable 946.596 946.596 ~ 946.596
MzDiff: none
n-[(1e)-4,10-dimethoxy-5,9-dimethyl-6-oxo-11-[(5e,7e,13e,19e,25s,29s)-15,17,29-trihydroxy-3,21,23-trimethoxy-5,12,18,24-tetramethyl-9,27-dioxo-10,26-dioxabicyclo[23.3.1]nonacosa-1(28),5,7,13,19-pentaen-11-yl]dodec-1-en-1-yl]-n-methylformamide (BioDeep_00002087005)
Formula: C52H83NO14 (945.5813)
-1.99 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000061405 Unreliable 946.5976 946.5975 ~ 946.5977
MzDiff: 0.5 ppm
PE(20:1(11Z)/LTE4) (BioDeep_00000186952)
Formula: C48H85N2O11PS (928.5611)
1.61 (100%) Mus musculus
[UBERON:0000956] cerebral cortex
MSI_000009092 Unreliable 946.607 946.607 ~ 946.607
MzDiff: none
PI(20:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) (BioDeep_00000201995)
Formula: C49H87O15P (946.5782)
3.08 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000009101 Unreliable 946.596 946.596 ~ 946.596
MzDiff: none
n-[(1e)-4,10-dimethoxy-5,9-dimethyl-6-oxo-11-[(5e,7e,13e,19e,25s,29s)-15,17,29-trihydroxy-3,21,23-trimethoxy-5,12,18,24-tetramethyl-9,27-dioxo-10,26-dioxabicyclo[23.3.1]nonacosa-1(28),5,7,13,19-pentaen-11-yl]dodec-1-en-1-yl]-n-methylformamide (BioDeep_00002087005)
Formula: C52H83NO14 (945.5813)
3.08 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000000530 Unavailable 946.596 946.596 ~ 946.596
MzDiff: none
n-[(1e)-4,10-dimethoxy-5,9-dimethyl-6-oxo-11-[(5e,7e,13e,19e,25s,29s)-15,17,29-trihydroxy-3,21,23-trimethoxy-5,12,18,24-tetramethyl-9,27-dioxo-10,26-dioxabicyclo[23.3.1]nonacosa-1(28),5,7,13,19-pentaen-11-yl]dodec-1-en-1-yl]-n-methylformamide (BioDeep_00002087005)
Formula: C52H83NO14 (945.5813)
-0.37 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000000539 Unavailable 946.607 946.607 ~ 946.607
MzDiff: none
PI(20:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) (BioDeep_00000201995)
Formula: C49H87O15P (946.5782)
-0.39 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000002519 Unreliable 946.5983 946.5983 ~ 946.5983
MzDiff: none
n-[(1e)-4,10-dimethoxy-5,9-dimethyl-6-oxo-11-[(5e,7e,13e,19e,25s,29s)-15,17,29-trihydroxy-3,21,23-trimethoxy-5,12,18,24-tetramethyl-9,27-dioxo-10,26-dioxabicyclo[23.3.1]nonacosa-1(28),5,7,13,19-pentaen-11-yl]dodec-1-en-1-yl]-n-methylformamide (BioDeep_00002087005)
Formula: C52H83NO14 (945.5813)
0.7 (100%) Rattus norvegicus
[UBERON:0001950] neocortex
MSI_000003090 Unreliable 946.5983 946.5983 ~ 946.5983
MzDiff: none
n-[(1e)-4,10-dimethoxy-5,9-dimethyl-6-oxo-11-[(5e,7e,13e,19e,25s,29s)-15,17,29-trihydroxy-3,21,23-trimethoxy-5,12,18,24-tetramethyl-9,27-dioxo-10,26-dioxabicyclo[23.3.1]nonacosa-1(28),5,7,13,19-pentaen-11-yl]dodec-1-en-1-yl]-n-methylformamide (BioDeep_00002087005)
Formula: C52H83NO14 (945.5813)
2.18 (100%) Rattus norvegicus
[UBERON:0002037] cerebellum
MSI_000005189 Unavailable 946.5983 946.5983 ~ 946.5983
MzDiff: none
n-[(1e)-4,10-dimethoxy-5,9-dimethyl-6-oxo-11-[(5e,7e,13e,19e,25s,29s)-15,17,29-trihydroxy-3,21,23-trimethoxy-5,12,18,24-tetramethyl-9,27-dioxo-10,26-dioxabicyclo[23.3.1]nonacosa-1(28),5,7,13,19-pentaen-11-yl]dodec-1-en-1-yl]-n-methylformamide (BioDeep_00002087005)
Formula: C52H83NO14 (945.5813)
-0.69 (100%) Rattus norvegicus
[UBERON:0002298] brainstem
MSI_000005819 Unavailable 946.5983 946.5983 ~ 946.5983
MzDiff: none
n-[(1e)-4,10-dimethoxy-5,9-dimethyl-6-oxo-11-[(5e,7e,13e,19e,25s,29s)-15,17,29-trihydroxy-3,21,23-trimethoxy-5,12,18,24-tetramethyl-9,27-dioxo-10,26-dioxabicyclo[23.3.1]nonacosa-1(28),5,7,13,19-pentaen-11-yl]dodec-1-en-1-yl]-n-methylformamide (BioDeep_00002087005)
Formula: C52H83NO14 (945.5813)
-0.69 (100%) Rattus norvegicus
[UBERON:0002435] striatum
MSI_000058698 Unreliable 946.5983 946.5983 ~ 946.5983
MzDiff: none
PI(20:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) (BioDeep_00000201995)
Formula: C49H87O15P (946.5782)
0.44 (100%) Mus musculus
[UBERON:0001950] neocortex
MSI_000060072 Unavailable 946.5975 946.5975 ~ 946.5975
MzDiff: none
PE(20:1(11Z)/LTE4) (BioDeep_00000186952)
Formula: C48H85N2O11PS (928.5611)
-0.91 (100%) Mus musculus
[UBERON:0002298] brainstem
MSI_000060467 Unavailable 946.5975 946.5975 ~ 946.5975
MzDiff: none
PE(20:1(11Z)/LTE4) (BioDeep_00000186952)
Formula: C48H85N2O11PS (928.5611)
-0.16 (100%) Mus musculus
[UBERON:0002421] hippocampal formation

Found 14 Sample Hits
Metabolite Species Sample
n-[(1e)-4,10-dimethoxy-5,9-dimethyl-6-oxo-11-[(5e,7e,13e,19e,25s,29s)-15,17,29-trihydroxy-3,21,23-trimethoxy-5,12,18,24-tetramethyl-9,27-dioxo-10,26-dioxabicyclo[23.3.1]nonacosa-1(28),5,7,13,19-pentaen-11-yl]dodec-1-en-1-yl]-n-methylformamide

Formula: C52H83NO14 (945.5813)
Adducts: [M+H]+ (Ppm: 7.8)
Mus musculus (Urinary bladder)
HR2MSI_mouse_urinary_bladder - S096
Resolution: 10μm, 260x134

Description

Mass spectrometry imaging of phospholipids in mouse urinary bladder (imzML dataset)
The spatial distribution of phospholipids in a tissue section of mouse urinary bladder was analyzed by MALDI MS imaging at 10 micrometer pixel size with high mass resolution (using an LTQ Orbitrap mass spectrometer).

R, ö, mpp A, Guenther S, Schober Y, Schulz O, Takats Z, Kummer W, Spengler B, Histology by mass spectrometry: label-free tissue characterization obtained from high-accuracy bioanalytical imaging. Angew Chem Int Ed Engl, 49(22):3834-8(2010)

Fig. S2: Single ion images of compounds shown in Fig. 1A-B : (upper left to lower right) m/z = 743.5482 (unknown), m/z = 741.5307 (SM (16:0), [M+K]+), m/z = 798.5410 (PC (34:1), [M+K]+), m/z = 616.1767 (heme b, M+), m/z = 772.5253 (PC (32:0), [M+K]+).

Stability of determined mass values was in the range of +/- 1 ppm over 22 hours of measurement (Fig. S4), with a standard deviation of 0.56 ppm. Accuracy data were obtained during tissue scanning experiments by monitoring the mass signal at nominal mass 798. The internal lock mass function of the Orbitrap instrument was used for automatic calibration during imaging measurements, using the known matrix-related ion signals at m/z = 137.0233, m/z = 444.0925 and m/z = 716.1246.

n-[(1e)-4,10-dimethoxy-5,9-dimethyl-6-oxo-11-[(5e,7e,13e,19e,25s,29s)-15,17,29-trihydroxy-3,21,23-trimethoxy-5,12,18,24-tetramethyl-9,27-dioxo-10,26-dioxabicyclo[23.3.1]nonacosa-1(28),5,7,13,19-pentaen-11-yl]dodec-1-en-1-yl]-n-methylformamide

Formula: C52H83NO14 (945.5813)
Adducts: [M+H]+ (Ppm: 10.2)
Rattus norvegicus (Brain)
Spectroswiss - sol_2x_br_2
Resolution: 17μm, 488x193

Description

PE(20:1(11Z)/LTE4)

Formula: C48H85N2O11PS (928.5611)
Adducts: [M+NH4]+ (Ppm: 6.6)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito03_18
Resolution: 17μm, 208x104

Description

m/z_946.6007

Formula: - (n/a)
Adducts: (Ppm: 0)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_43
Resolution: 17μm, 298x106

Description

PE(20:1(11Z)/LTE4)

Formula: C48H85N2O11PS (928.5611)
Adducts: [M+NH4]+ (Ppm: 6.2)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_44
Resolution: 17μm, 299x111

Description

PE(20:1(11Z)/LTE4)

Formula: C48H85N2O11PS (928.5611)
Adducts: [M+NH4]+ (Ppm: 5.5)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_46
Resolution: 17μm, 298x106

Description

m/z_946.6001

Formula: - (n/a)
Adducts: (Ppm: 0)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_47
Resolution: 17μm, 301x111

Description

PE(20:1(11Z)/LTE4)

Formula: C48H85N2O11PS (928.5611)
Adducts: [M+NH4]+ (Ppm: 5.8)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_04
Resolution: 17μm, 178x91

Description

PE(20:1(11Z)/LTE4)

Formula: C48H85N2O11PS (928.5611)
Adducts: [M+NH4]+ (Ppm: 5.7)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_03
Resolution: 17μm, 159x110

Description

PE(20:1(11Z)/LTE4)

Formula: C48H85N2O11PS (928.5611)
Adducts: [M+NH4]+ (Ppm: 6)
Rattus norvegicus (normal)
epik_dhb_head_ito01_05
Resolution: 17μm, 183x105

Description

PE(20:1(11Z)/LTE4)

Formula: C48H85N2O11PS (928.5611)
Adducts: [M+NH4]+ (Ppm: 6)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_06
Resolution: 17μm, 183x103

Description

PE(20:1(11Z)/LTE4)

Formula: C48H85N2O11PS (928.5611)
Adducts: [M+NH4]+ (Ppm: 5.8)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito03_14
Resolution: 17μm, 205x103

Description

PE(20:1(11Z)/LTE4)

Formula: C48H85N2O11PS (928.5611)
Adducts: [M+NH4]+ (Ppm: 12.4)
Mus musculus (Lung)
image1
Resolution: 40μm, 187x165

Description

Fig. 2 MALDI-MSI data from the same mouse lung tissue analyzed in Fig. 1. A: Optical image of the post-MSI, H&E-stained tissue section. B–D, F–G: Ion images of (B) m/z 796.6855 ([U13C-DPPC+Na]+), (C) m/z 756.5514 ([PC32:0+Na]+), (D) m/z 765.6079 ([D9-PC32:0+Na]+), (F) m/z 754.5359 ([PC32:1+Na]+), and (G) m/z 763.5923 ([D9-PC32:1+Na]+). E, H: Ratio images of (E) [D9-PC32:0+Na]+:[PC32:0+Na]+ and (H) [D9-PC32:1+Na]+:[PC32:1+Na]+. Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. U13C-DPPC, universally 13C-labeled dipalmitoyl PC; PC, phosphatidylcholine; MSI, mass spectrometry imaging; H&E, hematoxylin and eosin. Fig 1-3, Fig S1-S3, S5

PI(20:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R))

Formula: C49H87O15P (946.5782)
Adducts: [M-H2O+NH4]+ (Ppm: 3.4)
Mus musculus (brain)
Brain02_Bregma-3-88
Resolution: 17μm, 288x282

Description