在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 10 Reference Ions Near m/z 924.6407
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000007327 Unreliable 924.6315 924.6311 ~ 924.6318
MzDiff: 2.8 ppm
PC(22:3(10Z,13Z,16Z)/PGF2alpha) (BioDeep_00000213101)
Formula: C51H90NO11P (923.6251)
3.62 (100%) Rattus norvegicus
[UBERON:0004359] corpus epididymis
MSI_000008609 Unreliable 924.6313 924.6311 ~ 924.6318
MzDiff: 2.8 ppm
PC(22:3(10Z,13Z,16Z)/PGF2alpha) (BioDeep_00000213101)
Formula: C51H90NO11P (923.6251)
4.81 (100%) Rattus norvegicus
[UBERON:0004360] cauda epididymis
MSI_000011714 Unavailable 924.6395 924.6395 ~ 924.6395
MzDiff: none
PG(i-22:0/PGF1alpha) (BioDeep_00000197179)
Formula: C48H91O13P (906.6197)
-2.14 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000011718 Unavailable 924.6502 924.6502 ~ 924.6502
MzDiff: none
SM(d18:1/LTE4) (BioDeep_00000215516)
Formula: C46H84N3O9PS (885.5666)
-2.14 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000008947 Unreliable 924.6502 924.6502 ~ 924.6502
MzDiff: none
SM(d18:1/LTE4) (BioDeep_00000215516)
Formula: C46H84N3O9PS (885.5666)
3.19 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000008954 Unreliable 924.6395 924.6395 ~ 924.6395
MzDiff: none
PG(i-22:0/PGF1alpha) (BioDeep_00000197179)
Formula: C48H91O13P (906.6197)
3.19 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000000670 Unavailable 924.6395 924.6395 ~ 924.6395
MzDiff: none
PG(i-22:0/PGF1alpha) (BioDeep_00000197179)
Formula: C48H91O13P (906.6197)
-0.54 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000000672 Unavailable 924.6502 924.6502 ~ 924.6502
MzDiff: none
SM(d18:1/LTE4) (BioDeep_00000215516)
Formula: C46H84N3O9PS (885.5666)
-0.54 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000026236 Unreliable 924.6407 924.6407 ~ 924.6407
MzDiff: none
Not Annotated 1.79 (0%) Mus musculus
[UBERON:0000913] interstitial fluid
MSI_000027031 Unreliable 924.6314 924.6314 ~ 924.6314
MzDiff: none
PC(22:3(10Z,13Z,16Z)/PGF2alpha) (BioDeep_00000213101)
Formula: C51H90NO11P (923.6251)
1.78 (100%) Mus musculus
[UBERON:0002048] lung

Found 4 Sample Hits
Metabolite Species Sample
PG(i-22:0/PGF1alpha)

Formula: C48H91O13P (906.6197)
Adducts: [M+NH4]+ (Ppm: 15.2)
Mus musculus (Urinary bladder)
HR2MSI_mouse_urinary_bladder - S096
Resolution: 10μm, 260x134

Description

Mass spectrometry imaging of phospholipids in mouse urinary bladder (imzML dataset)
The spatial distribution of phospholipids in a tissue section of mouse urinary bladder was analyzed by MALDI MS imaging at 10 micrometer pixel size with high mass resolution (using an LTQ Orbitrap mass spectrometer).

R, ö, mpp A, Guenther S, Schober Y, Schulz O, Takats Z, Kummer W, Spengler B, Histology by mass spectrometry: label-free tissue characterization obtained from high-accuracy bioanalytical imaging. Angew Chem Int Ed Engl, 49(22):3834-8(2010)

Fig. S2: Single ion images of compounds shown in Fig. 1A-B : (upper left to lower right) m/z = 743.5482 (unknown), m/z = 741.5307 (SM (16:0), [M+K]+), m/z = 798.5410 (PC (34:1), [M+K]+), m/z = 616.1767 (heme b, M+), m/z = 772.5253 (PC (32:0), [M+K]+).

Stability of determined mass values was in the range of +/- 1 ppm over 22 hours of measurement (Fig. S4), with a standard deviation of 0.56 ppm. Accuracy data were obtained during tissue scanning experiments by monitoring the mass signal at nominal mass 798. The internal lock mass function of the Orbitrap instrument was used for automatic calibration during imaging measurements, using the known matrix-related ion signals at m/z = 137.0233, m/z = 444.0925 and m/z = 716.1246.

m/z_924.6407

Formula: - (n/a)
Adducts: (Ppm: 0)
Mus musculus (Lung)
image1
Resolution: 40μm, 187x165

Description

Fig. 2 MALDI-MSI data from the same mouse lung tissue analyzed in Fig. 1. A: Optical image of the post-MSI, H&E-stained tissue section. B–D, F–G: Ion images of (B) m/z 796.6855 ([U13C-DPPC+Na]+), (C) m/z 756.5514 ([PC32:0+Na]+), (D) m/z 765.6079 ([D9-PC32:0+Na]+), (F) m/z 754.5359 ([PC32:1+Na]+), and (G) m/z 763.5923 ([D9-PC32:1+Na]+). E, H: Ratio images of (E) [D9-PC32:0+Na]+:[PC32:0+Na]+ and (H) [D9-PC32:1+Na]+:[PC32:1+Na]+. Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. U13C-DPPC, universally 13C-labeled dipalmitoyl PC; PC, phosphatidylcholine; MSI, mass spectrometry imaging; H&E, hematoxylin and eosin. Fig 1-3, Fig S1-S3, S5

PS(22:4(7Z,10Z,13Z,16Z)/22:5(4Z,7Z,10Z,13Z,16Z))

Formula: C50H80NO10P (885.552)
Adducts: [M+K]+ (Ppm: 12.8)
Mus musculus (Lung)
image3
Resolution: 40μm, 146x190

Description

Fig. 4 MALDI-MSI data of mouse lung tissue after administration with D9-choline and U13C-DPPC–containing Poractant alfa surfactant (labels administered 12 h prior to tissue collection). Ion images of (A) m/z 796.6856 ([U13C-DPPC+Na]+), (B) m/z 756.5154 [PC32:0+Na]+), and (C) m/z 765.6079 ([D9-PC32:0+Na]+). D: Overlay image of [U13C-PC32:0+Na]+ (red) and [D9-PC32:0+Na]+ (green). Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

m/z_924.6394

Formula: - (n/a)
Adducts: (Ppm: 0)
Mus musculus (Lung)
image4
Resolution: 40μm, 162x156

Description

Fig 6c Fig. 6 MALDI-MSI of U13C-PC16:0/16:0 acyl chain remodeling. A: Averaged MALDI mass spectrum from lung tissue collected from mice euthanized 12 h after administration of D9-choline and U13C-DPPC–containing Poractant alfa surfactant. The ion at m/z 828.6321 is assigned as the [M+Na]+ ion of 13C24-PC16:0_20:4 formed by acyl remodeling of U13C-PC16:0/16:0. The “NL” value refers to the intensity of the base peak in the full range MS1 spectrum. B: MS/MS spectrum of precursor ions at m/z 828.5 ± 0.5 with fragment ions originating from [13C24-PC16:0_20:4+Na]+ annotated. Part-per-million (ppm) mass errors are provided in parentheses. C, D: MALDI-MSI data of [U13C-DPPC+Na]+ (blue), [PC36:4+Na]+ (green) and [13C24-PC16:0_20:4+Na]+ (red) in lung tissue collected from mice (C) 12 h and (D) 18 h after label administration. All images were visualized using total-ion-current normalization and hotspot removal (high quantile = 99%). MS/MS, tandem mass spectrometry; MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.