在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 13 Reference Ions Near m/z 850.5464
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000006217 Reliable 850.5535 850.5532 ~ 850.5539
MzDiff: 2.9 ppm
PE-NMe(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (BioDeep_00000106054)
Formula: C50H76NO8P (849.5308)
14.55 (100%) Rattus norvegicus
[UBERON:0004358] caput epididymis
MSI_000063344 Reliable 850.5532 850.553 ~ 850.5533
MzDiff: 1.2 ppm
PE-NMe(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (BioDeep_00000106054)
Formula: C50H76NO8P (849.5308)
0.68 (100%) Mus musculus
[UBERON:0000956] cerebral cortex
MSI_000009247 Unreliable 850.5552 850.5552 ~ 850.5552
MzDiff: none
SM(d18:1/LTE4) (BioDeep_00000215516)
Formula: C46H84N3O9PS (885.5666)
2.38 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000058489 Unreliable 850.5532 850.5532 ~ 850.5532
MzDiff: 0.0 ppm
PE-NMe(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (BioDeep_00000106054)
Formula: C50H76NO8P (849.5308)
0.81 (50%) Mus musculus
[UBERON:0001950] neocortex
MSI_000000271 Unreliable 850.5552 850.5552 ~ 850.5552
MzDiff: none
SM(d18:1/LTE4) (BioDeep_00000215516)
Formula: C46H84N3O9PS (885.5666)
1.12 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000001041 Unavailable 850.5492 850.5492 ~ 850.5492
MzDiff: none
PC(18:3/22:6) (BioDeep_00001979859)
Formula: C48H78NO8P (827.5465)
-0.18 (100%) Mus musculus
[UBERON:0001224] renal pelvis
MSI_000001911 Unavailable 850.5492 850.5492 ~ 850.5492
MzDiff: none
PC(18:3/22:6) (BioDeep_00001979859)
Formula: C48H78NO8P (827.5465)
-0.86 (100%) Mus musculus
[UBERON:0001225] cortex of kidney
MSI_000002371 Unavailable 850.5492 850.5492 ~ 850.5492
MzDiff: none
PC(18:3/22:6) (BioDeep_00001979859)
Formula: C48H78NO8P (827.5465)
-0.83 (100%) Mus musculus
[UBERON:0001293] outer medulla of kidney
MSI_000044253 Unreliable 850.5548 850.5548 ~ 850.5548
MzDiff: none
PE-NMe(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (BioDeep_00000106054)
Formula: C50H76NO8P (849.5308)
0.48 (100%) Rattus norvegicus
[UBERON:0002264] olfactory bulb
MSI_000059842 Unavailable 850.5532 850.5532 ~ 850.5532
MzDiff: none
Not Annotated -0.64 (0%) Mus musculus
[UBERON:0002298] brainstem
MSI_000060842 Unavailable 850.5532 850.5532 ~ 850.5532
MzDiff: none
Not Annotated -0.52 (0%) Mus musculus
[UBERON:0002421] hippocampal formation
MSI_000061835 Unavailable 850.5548 850.5548 ~ 850.5548
MzDiff: none
PE-NMe(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (BioDeep_00000106054)
Formula: C50H76NO8P (849.5308)
-0.45 (100%) Mus musculus
[UBERON:0000956] cerebral cortex
MSI_000062870 Unavailable 850.5548 850.5548 ~ 850.5548
MzDiff: none
PE-NMe(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (BioDeep_00000106054)
Formula: C50H76NO8P (849.5308)
-0.38 (100%) Mus musculus
[UBERON:0002421] hippocampal formation

Found 5 Sample Hits
Metabolite Species Sample
PC(18:3/22:6)

Formula: C48H78NO8P (827.5465)
Adducts: [M+Na]+ (Ppm: 15.9)
Mus musculus (Kidney)
FULL_MS_centriod_CHCA_20210819
Resolution: 17μm, 638x437

Description

AP-MALDI instrument demo test, mass spectrum scan in centroid mode.

m/z_850.5474

Formula: - (n/a)
Adducts: (Ppm: 0)
Mus musculus (Lung)
image1
Resolution: 40μm, 187x165

Description

Fig. 2 MALDI-MSI data from the same mouse lung tissue analyzed in Fig. 1. A: Optical image of the post-MSI, H&E-stained tissue section. B–D, F–G: Ion images of (B) m/z 796.6855 ([U13C-DPPC+Na]+), (C) m/z 756.5514 ([PC32:0+Na]+), (D) m/z 765.6079 ([D9-PC32:0+Na]+), (F) m/z 754.5359 ([PC32:1+Na]+), and (G) m/z 763.5923 ([D9-PC32:1+Na]+). E, H: Ratio images of (E) [D9-PC32:0+Na]+:[PC32:0+Na]+ and (H) [D9-PC32:1+Na]+:[PC32:1+Na]+. Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. U13C-DPPC, universally 13C-labeled dipalmitoyl PC; PC, phosphatidylcholine; MSI, mass spectrometry imaging; H&E, hematoxylin and eosin. Fig 1-3, Fig S1-S3, S5

PE-NMe(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))

Formula: C50H76NO8P (849.5308)
Adducts: [M+H]+ (Ppm: 15.4)
Mus musculus (Lung)
image3
Resolution: 40μm, 146x190

Description

Fig. 4 MALDI-MSI data of mouse lung tissue after administration with D9-choline and U13C-DPPC–containing Poractant alfa surfactant (labels administered 12 h prior to tissue collection). Ion images of (A) m/z 796.6856 ([U13C-DPPC+Na]+), (B) m/z 756.5154 [PC32:0+Na]+), and (C) m/z 765.6079 ([D9-PC32:0+Na]+). D: Overlay image of [U13C-PC32:0+Na]+ (red) and [D9-PC32:0+Na]+ (green). Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

PE-NMe(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))

Formula: C50H76NO8P (849.5308)
Adducts: [M+H]+ (Ppm: 15.8)
Mus musculus (Lung)
image5
Resolution: 40μm, 163x183

Description

Supplementary Figure S8. MALDI-MSI data of mouse lung tissue administered with D9-choline and U 13C-DPPC–containing Poractant alfa surfactant (labels administered 18 h prior to sacrifice). Ion images of (a) m/z 796.6856 ([U13C-DPPC+Na]+), (b) m/z 756.5154 [PC32:0+Na]+ and (c) m/z 765.6079 ([D9-PC32:0+Na]+). (d) Overlay image of [U13C-DPPC+Na]+ (red) and [D9-PC32:0+Na]+ (green). Parts per million (ppm) mass errors are indicated in parentheses. All images were visualised using totalion-current normalisation and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0.

PE-NMe(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))

Formula: C50H76NO8P (849.5308)
Adducts: [M+H]+ (Ppm: 9.8)
Mus musculus (Lung)
image2
Resolution: 40μm, 550x256

Description

Supplementary Figure S6. Ion distribution images for (a) [PC36:4+Na]+ (m/z 804.5514) and (b) [PC38:6+Na]+ (m/z 828.5515) obtained from mouse lung tissue collected 6 h after administration of D9- choline and U13C-DPPC–containing CHF5633. Parts-per-million (ppm) mass errors are indicated in parentheses. (c) Magnification of the boxed region in (a) with selected bronchiolar regions outlined in white boxes. (d) The corresponding H&E-stained tissue section with the same selected bronchiolar regions outlined in black boxes. These data demonstrate the co-localisation of the polyunsaturated lipids PC36:4 and PC38:6 with the bronchiolar regions of the lung. All MSI images were visualised using total ion current normalisation and hotspot removal (high quantile = 99%).