在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 20 Reference Ions Near m/z 828.59
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000006267 Reliable 828.5894 828.589 ~ 828.59
MzDiff: 3.9 ppm
SM(d20:1/PGF2alpha) (BioDeep_00000215722)
Formula: C45H85N2O9P (828.5992)
10.58 (48%) Rattus norvegicus
[UBERON:0004358] caput epididymis
MSI_000020327 Reliable 828.5985 828.5981 ~ 828.5988
MzDiff: 2.6 ppm
PC(18:0/20:3(6,8,11)-OH(5)) (BioDeep_00000211301)
Formula: C46H86NO9P (827.604)
6.97 (100%) Rattus norvegicus
[UBERON:0004358] caput epididymis
MSI_000061407 Unavailable 828.58 828.58 ~ 828.58
MzDiff: none
PA(22:0/PGJ2) (BioDeep_00000190578)
Formula: C45H79O10P (810.5411)
-1.03 (100%) Mus musculus
[UBERON:0000956] cerebral cortex
MSI_000002676 Unavailable 828.5807 828.5807 ~ 828.5807
MzDiff: none
PA(22:0/PGJ2) (BioDeep_00000190578)
Formula: C45H79O10P (810.5411)
-0.22 (100%) Rattus norvegicus
[UBERON:0001950] neocortex
MSI_000003449 Unavailable 828.5807 828.5807 ~ 828.5807
MzDiff: none
PA(22:0/PGJ2) (BioDeep_00000190578)
Formula: C45H79O10P (810.5411)
-0.45 (100%) Rattus norvegicus
[UBERON:0002037] cerebellum
MSI_000004900 Unreliable 828.5807 828.5807 ~ 828.5807
MzDiff: none
PA(22:0/PGJ2) (BioDeep_00000190578)
Formula: C45H79O10P (810.5411)
0.55 (100%) Rattus norvegicus
[UBERON:0002298] brainstem
MSI_000005669 Unavailable 828.5807 828.5807 ~ 828.5807
MzDiff: none
PA(22:0/PGJ2) (BioDeep_00000190578)
Formula: C45H79O10P (810.5411)
-0.43 (100%) Rattus norvegicus
[UBERON:0002435] striatum
MSI_000026644 Unreliable 828.5804 828.5804 ~ 828.5804
MzDiff: none
PE(20:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) (BioDeep_00000186850)
Formula: C45H82NO10P (827.5676)
1.79 (100%) Mus musculus
[UBERON:0002048] lung
MSI_000028441 Unreliable 828.5954 828.5954 ~ 828.5954
MzDiff: none
PC(18:0/20:3(6,8,11)-OH(5)) (BioDeep_00000211301)
Formula: C46H86NO9P (827.604)
1.13 (100%) Macropus giganteus
[UBERON:0001891] midbrain
MSI_000028577 Unreliable 828.5878 828.5878 ~ 828.5878
MzDiff: none
Not Annotated 0.83 (0%) Macropus giganteus
[UBERON:0001891] midbrain
MSI_000028931 Unreliable 828.5822 828.5822 ~ 828.5822
MzDiff: none
PE(22:1(13Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (BioDeep_00000030746)
Formula: C49H84NO8P (845.5934)
0.16 (100%) Macropus giganteus
[UBERON:0001891] midbrain
MSI_000029202 Unreliable 828.5878 828.5878 ~ 828.5878
MzDiff: none
Not Annotated 1.64 (0%) Macropus giganteus
[UBERON:0002336] corpus callosum
MSI_000029277 Unreliable 828.5822 828.5822 ~ 828.5822
MzDiff: none
PE(22:1(13Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (BioDeep_00000030746)
Formula: C49H84NO8P (845.5934)
1.41 (100%) Macropus giganteus
[UBERON:0002336] corpus callosum
MSI_000059111 Unavailable 828.5906 828.5906 ~ 828.5906
MzDiff: none
Not Annotated -0.7 (0%) Mus musculus
[UBERON:0001950] neocortex
MSI_000059500 Unreliable 828.5906 828.5906 ~ 828.5906
MzDiff: none
Not Annotated 1.14 (0%) Mus musculus
[UBERON:0002298] brainstem
MSI_000060511 Unreliable 828.58 828.58 ~ 828.58
MzDiff: none
PA(22:0/PGJ2) (BioDeep_00000190578)
Formula: C45H79O10P (810.5411)
1.94 (100%) Mus musculus
[UBERON:0002421] hippocampal formation
MSI_000060709 Unavailable 828.5906 828.5906 ~ 828.5906
MzDiff: none
Not Annotated -0.44 (0%) Mus musculus
[UBERON:0002421] hippocampal formation
MSI_000061539 Unavailable 828.5918 828.5918 ~ 828.5918
MzDiff: none
Not Annotated -0.35 (0%) Mus musculus
[UBERON:0000956] cerebral cortex
MSI_000062293 Unavailable 828.5918 828.5918 ~ 828.5918
MzDiff: none
Not Annotated -0.35 (0%) Mus musculus
[UBERON:0001950] neocortex
MSI_000062853 Unavailable 828.5918 828.5918 ~ 828.5918
MzDiff: none
Not Annotated -0.35 (0%) Mus musculus
[UBERON:0002421] hippocampal formation

Found 19 Sample Hits
Metabolite Species Sample
SM(d20:1/PGF2alpha)

Formula: C45H85N2O9P (828.5992)
Adducts: [M]+ (Ppm: 10.6)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito03_17
Resolution: 17μm, 208x108

Description

1 male adult wild-type rat was obtained from Inserm U1085 - Irset Research Institute (University of Rennes1, France). Animals were age 60 days and were reared under ad-lib conditions. Care and handling of all animals complied with EU directive 2010/63/EU on the protection of animals used for scientific purposes. The whole epididymis was excised from each animal immediately post-mortem, loosely wrapped rapidly in an aluminum foil and a 2.5% (w/v) carboxymethylcellulose (CMC) solution was poured to embed the epididymis to preserve their morphology. To remove air bubbles, the filled aluminum molds was gently freezed by depositing it on isopentane or dry ice, then on the nitrogen vapors and finally by progressively dipping the CMC/sample coated with aluminum foil into liquid nitrogen (or only flush with liquid nitrogen). Frozen tissues were stored at -80 °C until use to avoid degradation.

SM(d20:1/PGF2alpha)

Formula: C45H85N2O9P (828.5992)
Adducts: [M]+ (Ppm: 10.5)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito03_18
Resolution: 17μm, 208x104

Description

PE(22:0/22:6(5Z,7Z,10Z,13Z,16Z,19Z)-OH(4))

Formula: C49H86NO9P (863.604)
Adducts: [M+H-2H2O]+ (Ppm: 0.6)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_43
Resolution: 17μm, 298x106

Description

SM(d20:1/PGF2alpha)

Formula: C45H85N2O9P (828.5992)
Adducts: [M]+ (Ppm: 11.1)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_44
Resolution: 17μm, 299x111

Description

3-O-Sulfogalactosylceramide (d18:1/22:0)

Formula: C46H89NO11S (863.6156)
Adducts: [M+H-2H2O]+ (Ppm: 15.3)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_46
Resolution: 17μm, 298x106

Description

3-O-Sulfogalactosylceramide (d18:1/22:0)

Formula: C46H89NO11S (863.6156)
Adducts: [M+H-2H2O]+ (Ppm: 15.4)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_47
Resolution: 17μm, 301x111

Description

3-O-Sulfogalactosylceramide (d18:1/22:0)

Formula: C46H89NO11S (863.6156)
Adducts: [M+H-2H2O]+ (Ppm: 15.6)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_48
Resolution: 17μm, 294x107

Description

SM(d20:1/PGF2alpha)

Formula: C45H85N2O9P (828.5992)
Adducts: [M]+ (Ppm: 11.1)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_04
Resolution: 17μm, 178x91

Description

SM(d20:1/PGF2alpha)

Formula: C45H85N2O9P (828.5992)
Adducts: [M]+ (Ppm: 11.2)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_03
Resolution: 17μm, 159x110

Description

SM(d20:1/PGF2alpha)

Formula: C45H85N2O9P (828.5992)
Adducts: [M]+ (Ppm: 10.8)
Rattus norvegicus (normal)
epik_dhb_head_ito01_05
Resolution: 17μm, 183x105

Description

SM(d20:1/PGF2alpha)

Formula: C45H85N2O9P (828.5992)
Adducts: [M]+ (Ppm: 11)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_06
Resolution: 17μm, 183x103

Description

SM(d20:1/PGF2alpha)

Formula: C45H85N2O9P (828.5992)
Adducts: [M]+ (Ppm: 10.8)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito03_14
Resolution: 17μm, 205x103

Description

SM(d20:1/PGF2alpha)

Formula: C45H85N2O9P (828.5992)
Adducts: [M]+ (Ppm: 18.1)
Mus musculus (Lung)
image5
Resolution: 40μm, 163x183

Description

Supplementary Figure S8. MALDI-MSI data of mouse lung tissue administered with D9-choline and U 13C-DPPC–containing Poractant alfa surfactant (labels administered 18 h prior to sacrifice). Ion images of (a) m/z 796.6856 ([U13C-DPPC+Na]+), (b) m/z 756.5154 [PC32:0+Na]+ and (c) m/z 765.6079 ([D9-PC32:0+Na]+). (d) Overlay image of [U13C-DPPC+Na]+ (red) and [D9-PC32:0+Na]+ (green). Parts per million (ppm) mass errors are indicated in parentheses. All images were visualised using totalion-current normalisation and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0.

SM(d20:1/PGF2alpha)

Formula: C45H85N2O9P (828.5992)
Adducts: [M]+ (Ppm: 17.7)
Mus musculus (Lung)
image2
Resolution: 40μm, 550x256

Description

Supplementary Figure S6. Ion distribution images for (a) [PC36:4+Na]+ (m/z 804.5514) and (b) [PC38:6+Na]+ (m/z 828.5515) obtained from mouse lung tissue collected 6 h after administration of D9- choline and U13C-DPPC–containing CHF5633. Parts-per-million (ppm) mass errors are indicated in parentheses. (c) Magnification of the boxed region in (a) with selected bronchiolar regions outlined in white boxes. (d) The corresponding H&E-stained tissue section with the same selected bronchiolar regions outlined in black boxes. These data demonstrate the co-localisation of the polyunsaturated lipids PC36:4 and PC38:6 with the bronchiolar regions of the lung. All MSI images were visualised using total ion current normalisation and hotspot removal (high quantile = 99%).

m/z_828.5878

Formula: - (n/a)
Adducts: (Ppm: 0)
Macropus giganteus (Brain)
170321_kangaroobrain-dan3-pos_maxof50.0_med1
Resolution: 50μm, 81x50

Description

Sample information Organism: Macropus giganteus (kangaroo) Organism part: Brain Condition: Wildtype Sample growth conditions: Wild

PE(22:0/22:6(5Z,7Z,10Z,13Z,16Z,19Z)-OH(4))

Formula: C49H86NO9P (863.604)
Adducts: [M+H-2H2O]+ (Ppm: 2)
Homo sapiens (esophagus)
LNTO22_1_3
Resolution: 75μm, 121x68

Description

PE(20:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R))

Formula: C45H82NO10P (827.5676)
Adducts: [M+H]+ (Ppm: 15.6)
Mytilus edulis (mantle)
20190216_MS38_Mytilus_mantle_350-1500_DHB_pos_A26_10um_275x210
Resolution: 10μm, 275x210

Description

m/z_828.5906

Formula: - (n/a)
Adducts: (Ppm: 0)
Mus musculus (brain)
Brain01_Bregma-3-88b_centroid
Resolution: 17μm, 265x320

Description

m/z_828.5918

Formula: - (n/a)
Adducts: (Ppm: 0)
Mus musculus (brain)
Brain01_Bregma1-42_02_centroid
Resolution: 17μm, 434x258

Description