在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 9 Reference Ions Near m/z 657.022
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000010733 Unreliable 657.0165 657.0165 ~ 657.0165
MzDiff: none
4-bromo-n-{[(1r,2r,3s,4s)-2-{[(4-bromo-1h-pyrrol-2-yl)formamido]methyl}-3-[(4r)-5-hydroxy-2-imino-3,4-dihydroimidazol-4-yl]-4-(2-imino-1,3-dihydroimidazol-4-yl)cyclobutyl]methyl}-1h-pyrrole-2-carboxamide (BioDeep_00002071366)
Formula: C22H24Br2N10O3 (634.0399)
3.41 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000017771 Unreliable 657.02 657.02 ~ 657.02
MzDiff: none
NCGC00380983-01! (BioDeep_00000401285)
Formula: C28H24N2O11S4 (692.0263)
1.46 (100%) Vitis vinifera
[PO:0009087] mesocarp
MSI_000010732 Unreliable 657.0224 657.0224 ~ 657.0224
MzDiff: none
Not Annotated 3.42 (%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000010728 Unreliable 657.0298 657.0298 ~ 657.0298
MzDiff: none
Heparan sulfate (BioDeep_00000027629)
Formula: C14H25NO21S3 (639.0081)
3.48 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000055358 Unreliable 657.0129 657.0129 ~ 657.0129
MzDiff: none
Not Annotated 1.46 (%) MALDI - DHB
[NOVOCELL:BACKGROUND] blank
MSI_000016216 Unreliable 657.0262 657.0262 ~ 657.0262
MzDiff: none
Not Annotated 2.18 (%) Vitis vinifera
[PO:0009085] exocarp
MSI_000000870 Unavailable 657.0165 657.0165 ~ 657.0165
MzDiff: none
4-bromo-n-{[(1r,2r,3s,4s)-2-{[(4-bromo-1h-pyrrol-2-yl)formamido]methyl}-3-[(4r)-5-hydroxy-2-imino-3,4-dihydroimidazol-4-yl]-4-(2-imino-1,3-dihydroimidazol-4-yl)cyclobutyl]methyl}-1h-pyrrole-2-carboxamide (BioDeep_00002071366)
Formula: C22H24Br2N10O3 (634.0399)
-0.68 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000000814 Unavailable 657.0224 657.0224 ~ 657.0224
MzDiff: none
Not Annotated -0.61 (%) Mus musculus
[CL:0000066] epithelial cell
MSI_000000558 Unavailable 657.0298 657.0298 ~ 657.0298
MzDiff: none
Heparan sulfate (BioDeep_00000027629)
Formula: C14H25NO21S3 (639.0081)
-0.43 (100%) Mus musculus
[CL:0000066] epithelial cell

Found 6 Sample Hits
Metabolite Species Sample
m/z_657.0224

Formula: - (n/a)
Adducts: (Ppm: )
Mus musculus (Urinary bladder)
HR2MSI_mouse_urinary_bladder - S096
Resolution: 10μm, 260x134

Description

Mass spectrometry imaging of phospholipids in mouse urinary bladder (imzML dataset)
The spatial distribution of phospholipids in a tissue section of mouse urinary bladder was analyzed by MALDI MS imaging at 10 micrometer pixel size with high mass resolution (using an LTQ Orbitrap mass spectrometer).

R, ö, mpp A, Guenther S, Schober Y, Schulz O, Takats Z, Kummer W, Spengler B, Histology by mass spectrometry: label-free tissue characterization obtained from high-accuracy bioanalytical imaging. Angew Chem Int Ed Engl, 49(22):3834-8(2010)

Fig. S2: Single ion images of compounds shown in Fig. 1A-B : (upper left to lower right) m/z = 743.5482 (unknown), m/z = 741.5307 (SM (16:0), [M+K]+), m/z = 798.5410 (PC (34:1), [M+K]+), m/z = 616.1767 (heme b, M+), m/z = 772.5253 (PC (32:0), [M+K]+).

Stability of determined mass values was in the range of +/- 1 ppm over 22 hours of measurement (Fig. S4), with a standard deviation of 0.56 ppm. Accuracy data were obtained during tissue scanning experiments by monitoring the mass signal at nominal mass 798. The internal lock mass function of the Orbitrap instrument was used for automatic calibration during imaging measurements, using the known matrix-related ion signals at m/z = 137.0233, m/z = 444.0925 and m/z = 716.1246.

NCGC00380983-01!

Formula: C28H24N2O11S4 (692.0263)
Adducts: [M+H-2H2O]+ (Ppm: 14.6)
Vitis vinifera (Fruit)
grape_dhb_91_1
Resolution: 50μm, 120x114

Description

Grape berries fruit, condition: Ripe

4-bromo-n-{[(1r,2r,3s,4s)-2-{[(4-bromo-1h-pyrrol-2-yl)formamido]methyl}-3-[(4r)-5-hydroxy-2-imino-3,4-dihydroimidazol-4-yl]-4-(2-imino-1,3-dihydroimidazol-4-yl)cyclobutyl]methyl}-1h-pyrrole-2-carboxamide

Formula: C22H24Br2N10O3 (634.0399)
Adducts: [M+Na]+ (Ppm: 4.8)
Vitis vinifera (Fruit)
grape_dhb_164_1
Resolution: 17μm, 136x122

Description

Grape berries fruit, condition: Late

NCGC00380983-01!

Formula: C28H24N2O11S4 (692.0263)
Adducts: [M+H-2H2O]+ (Ppm: 11.5)
Vitis vinifera (Fruit)
grape_dhb_163_1
Resolution: 17μm, 132x115

Description

Grape berries fruit, condition: Late

m/z_657.0223

Formula: - (n/a)
Adducts: (Ppm: )
Mus musculus (Lung)
image4
Resolution: 40μm, 162x156

Description

Fig 6c Fig. 6 MALDI-MSI of U13C-PC16:0/16:0 acyl chain remodeling. A: Averaged MALDI mass spectrum from lung tissue collected from mice euthanized 12 h after administration of D9-choline and U13C-DPPC–containing Poractant alfa surfactant. The ion at m/z 828.6321 is assigned as the [M+Na]+ ion of 13C24-PC16:0_20:4 formed by acyl remodeling of U13C-PC16:0/16:0. The “NL” value refers to the intensity of the base peak in the full range MS1 spectrum. B: MS/MS spectrum of precursor ions at m/z 828.5 ± 0.5 with fragment ions originating from [13C24-PC16:0_20:4+Na]+ annotated. Part-per-million (ppm) mass errors are provided in parentheses. C, D: MALDI-MSI data of [U13C-DPPC+Na]+ (blue), [PC36:4+Na]+ (green) and [13C24-PC16:0_20:4+Na]+ (red) in lung tissue collected from mice (C) 12 h and (D) 18 h after label administration. All images were visualized using total-ion-current normalization and hotspot removal (high quantile = 99%). MS/MS, tandem mass spectrometry; MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

m/z_657.0242

Formula: - (n/a)
Adducts: (Ppm: )
Mus musculus (Lung)
image5
Resolution: 40μm, 163x183

Description

Supplementary Figure S8. MALDI-MSI data of mouse lung tissue administered with D9-choline and U 13C-DPPC–containing Poractant alfa surfactant (labels administered 18 h prior to sacrifice). Ion images of (a) m/z 796.6856 ([U13C-DPPC+Na]+), (b) m/z 756.5154 [PC32:0+Na]+ and (c) m/z 765.6079 ([D9-PC32:0+Na]+). (d) Overlay image of [U13C-DPPC+Na]+ (red) and [D9-PC32:0+Na]+ (green). Parts per million (ppm) mass errors are indicated in parentheses. All images were visualised using totalion-current normalisation and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0.