在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 13 Reference Ions Near m/z 567.0444
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000053665 Reliable 567.0533 567.053 ~ 567.0538
MzDiff: 3.2 ppm
3-(3,4-dihydroxyphenyl)-5-[2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-4-oxochromen-8-yl]-8,10-dihydroxy-2,4-dioxatricyclo[5.4.0.0³,⁵]undeca-1(11),7,9-trien-6-one (BioDeep_00002239918)
Formula: C30H18O14 (602.0697)
6.05 (73%) MALDI - CHCA
[NOVOCELL:BACKGROUND] blank
MSI_000011477 Unreliable 567.0444 567.0444 ~ 567.0444
MzDiff: none
methyl (2s)-5,7-dichloro-6'-methoxy-6-methyl-3,4'-dioxo-4-{[(1r,4r,5r,6s)-4,5,6-trihydroxy-2-(methoxycarbonyl)cyclohex-2-en-1-yl]oxy}spiro[1-benzofuran-2,1'-cyclohexane]-2',5'-diene-2'-carboxylate (BioDeep_00002329812)
Formula: C25H22Cl2O12 (584.0488)
0.11 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000025486 Unreliable 567.0527 567.0522 ~ 567.0529
MzDiff: 2.8 ppm
Eumelanins (BioDeep_00000178947)
Formula: C23H20N4O8S2 (544.0723)
3.3 (100%) Mus musculus
[UBERON:0000913] interstitial fluid
MSI_000010565 Unavailable 567.0536 567.0536 ~ 567.0536
MzDiff: 0.0 ppm
Phlorofucofuroeckol A (BioDeep_00000369847)
Formula: C30H18O14 (602.0697)
-1.83 (100%) Bathymodiolus
[UBERON:0009120] gill filament
MSI_000009241 Unreliable 567.0444 567.0444 ~ 567.0444
MzDiff: none
methyl (2s)-5,7-dichloro-6'-methoxy-6-methyl-3,4'-dioxo-4-{[(1r,4r,5r,6s)-4,5,6-trihydroxy-2-(methoxycarbonyl)cyclohex-2-en-1-yl]oxy}spiro[1-benzofuran-2,1'-cyclohexane]-2',5'-diene-2'-carboxylate (BioDeep_00002329812)
Formula: C25H22Cl2O12 (584.0488)
2.51 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000012286 Unavailable 567.0536 567.0536 ~ 567.0536
MzDiff: 0.0 ppm
Phlorofucofuroeckol A (BioDeep_00000369847)
Formula: C30H18O14 (602.0697)
-1.17 (100%) Bathymodiolus
[UBERON:2000211] gill lamella
MSI_000033968 Unreliable 567.053 567.053 ~ 567.053
MzDiff: none
3-(3,4-dihydroxyphenyl)-5-[2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-4-oxochromen-8-yl]-8,10-dihydroxy-2,4-dioxatricyclo[5.4.0.0³,⁵]undeca-1(11),7,9-trien-6-one (BioDeep_00002239918)
Formula: C30H18O14 (602.0697)
0.15 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000037617 Unreliable 567.0532 567.0532 ~ 567.0532
MzDiff: none
3-(3,4-dihydroxyphenyl)-5-[2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-4-oxochromen-8-yl]-8,10-dihydroxy-2,4-dioxatricyclo[5.4.0.0³,⁵]undeca-1(11),7,9-trien-6-one (BioDeep_00002239918)
Formula: C30H18O14 (602.0697)
0.66 (100%) Posidonia oceanica
[UBERON:0000329] hair root
MSI_000012887 Unavailable 567.0536 567.0536 ~ 567.0536
MzDiff: none
Phlorofucofuroeckol A (BioDeep_00000369847)
Formula: C30H18O14 (602.0697)
-0.51 (100%) Plant
[PO:0005020] vascular bundle
MSI_000014030 Unavailable 567.0536 567.0536 ~ 567.0536
MzDiff: none
Phlorofucofuroeckol A (BioDeep_00000369847)
Formula: C30H18O14 (602.0697)
-0.24 (100%) Plant
[PO:0005417] phloem
MSI_000014987 Unavailable 567.0536 567.0536 ~ 567.0536
MzDiff: none
Phlorofucofuroeckol A (BioDeep_00000369847)
Formula: C30H18O14 (602.0697)
-0.51 (100%) Plant
[PO:0006036] root epidermis
MSI_000018395 Unreliable 567.0536 567.0536 ~ 567.0536
MzDiff: none
Phlorofucofuroeckol A (BioDeep_00000369847)
Formula: C30H18O14 (602.0697)
1.78 (100%) Plant
[PO:0020124] root stele
MSI_000020029 Unavailable 567.0536 567.0536 ~ 567.0536
MzDiff: none
Phlorofucofuroeckol A (BioDeep_00000369847)
Formula: C30H18O14 (602.0697)
-0.51 (100%) Plant
[PO:0025197] stele

Found 6 Sample Hits
Metabolite Species Sample
methyl (2s)-5,7-dichloro-6'-methoxy-6-methyl-3,4'-dioxo-4-{[(1r,4r,5r,6s)-4,5,6-trihydroxy-2-(methoxycarbonyl)cyclohex-2-en-1-yl]oxy}spiro[1-benzofuran-2,1'-cyclohexane]-2',5'-diene-2'-carboxylate

Formula: C25H22Cl2O12 (584.0488)
Adducts: [M+H-H2O]+ (Ppm: 2)
Mus musculus (Urinary bladder)
HR2MSI_mouse_urinary_bladder - S096
Resolution: 10μm, 260x134

Description

Mass spectrometry imaging of phospholipids in mouse urinary bladder (imzML dataset)
The spatial distribution of phospholipids in a tissue section of mouse urinary bladder was analyzed by MALDI MS imaging at 10 micrometer pixel size with high mass resolution (using an LTQ Orbitrap mass spectrometer).

R, ö, mpp A, Guenther S, Schober Y, Schulz O, Takats Z, Kummer W, Spengler B, Histology by mass spectrometry: label-free tissue characterization obtained from high-accuracy bioanalytical imaging. Angew Chem Int Ed Engl, 49(22):3834-8(2010)

Fig. S2: Single ion images of compounds shown in Fig. 1A-B : (upper left to lower right) m/z = 743.5482 (unknown), m/z = 741.5307 (SM (16:0), [M+K]+), m/z = 798.5410 (PC (34:1), [M+K]+), m/z = 616.1767 (heme b, M+), m/z = 772.5253 (PC (32:0), [M+K]+).

Stability of determined mass values was in the range of +/- 1 ppm over 22 hours of measurement (Fig. S4), with a standard deviation of 0.56 ppm. Accuracy data were obtained during tissue scanning experiments by monitoring the mass signal at nominal mass 798. The internal lock mass function of the Orbitrap instrument was used for automatic calibration during imaging measurements, using the known matrix-related ion signals at m/z = 137.0233, m/z = 444.0925 and m/z = 716.1246.

[(2s,4s,5r)-2-{[2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxochromen-3-yl]oxy}-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxidanesulfonic acid

Formula: C21H20O15S (544.0523)
Adducts: [M+Na]+ (Ppm: 3.9)
Vitis vinifera (Fruit)
grape_dhb_91_1
Resolution: 50μm, 120x114

Description

Grape berries fruit, condition: Ripe

Eumelanins

Formula: C23H20N4O8S2 (544.0723)
Adducts: [M+Na]+ (Ppm: 16.4)
Mus musculus (Lung)
image3
Resolution: 40μm, 146x190

Description

Fig. 4 MALDI-MSI data of mouse lung tissue after administration with D9-choline and U13C-DPPC–containing Poractant alfa surfactant (labels administered 12 h prior to tissue collection). Ion images of (A) m/z 796.6856 ([U13C-DPPC+Na]+), (B) m/z 756.5154 [PC32:0+Na]+), and (C) m/z 765.6079 ([D9-PC32:0+Na]+). D: Overlay image of [U13C-PC32:0+Na]+ (red) and [D9-PC32:0+Na]+ (green). Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

m/z_567.0493

Formula: - (n/a)
Adducts: (Ppm: )
Mus musculus (Lung)
image4
Resolution: 40μm, 162x156

Description

Fig 6c Fig. 6 MALDI-MSI of U13C-PC16:0/16:0 acyl chain remodeling. A: Averaged MALDI mass spectrum from lung tissue collected from mice euthanized 12 h after administration of D9-choline and U13C-DPPC–containing Poractant alfa surfactant. The ion at m/z 828.6321 is assigned as the [M+Na]+ ion of 13C24-PC16:0_20:4 formed by acyl remodeling of U13C-PC16:0/16:0. The “NL” value refers to the intensity of the base peak in the full range MS1 spectrum. B: MS/MS spectrum of precursor ions at m/z 828.5 ± 0.5 with fragment ions originating from [13C24-PC16:0_20:4+Na]+ annotated. Part-per-million (ppm) mass errors are provided in parentheses. C, D: MALDI-MSI data of [U13C-DPPC+Na]+ (blue), [PC36:4+Na]+ (green) and [13C24-PC16:0_20:4+Na]+ (red) in lung tissue collected from mice (C) 12 h and (D) 18 h after label administration. All images were visualized using total-ion-current normalization and hotspot removal (high quantile = 99%). MS/MS, tandem mass spectrometry; MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

Eumelanins

Formula: C23H20N4O8S2 (544.0723)
Adducts: [M+Na]+ (Ppm: 15.3)
Mus musculus (Lung)
image5
Resolution: 40μm, 163x183

Description

Supplementary Figure S8. MALDI-MSI data of mouse lung tissue administered with D9-choline and U 13C-DPPC–containing Poractant alfa surfactant (labels administered 18 h prior to sacrifice). Ion images of (a) m/z 796.6856 ([U13C-DPPC+Na]+), (b) m/z 756.5154 [PC32:0+Na]+ and (c) m/z 765.6079 ([D9-PC32:0+Na]+). (d) Overlay image of [U13C-DPPC+Na]+ (red) and [D9-PC32:0+Na]+ (green). Parts per million (ppm) mass errors are indicated in parentheses. All images were visualised using totalion-current normalisation and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0.

3-(3,4-dihydroxyphenyl)-5-[2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-4-oxochromen-8-yl]-8,10-dihydroxy-2,4-dioxatricyclo[5.4.0.0³,⁵]undeca-1(11),7,9-trien-6-one

Formula: C30H18O14 (602.0697)
Adducts: [M+H-2H2O]+ (Ppm: 4.6)
Posidonia oceanica (root)
20190828_MS1_A19r-22
Resolution: 17μm, 292x279

Description