在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 7 Reference Ions Near m/z 556.0525
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000010997 Unreliable 556.047 556.047 ~ 556.047
MzDiff: none
5-Amino-1-[carboxy(methyl)amino]pentane-1,1,2,2,3,3,4,4,5-nonacarboxylic acid (BioDeep_00000185384)
Formula: C16H16N2O20 (556.0296)
2.68 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000011254 Unreliable 556.0555 556.0555 ~ 556.0555
MzDiff: none
2-[(2s,6r,7r,10r)-7,15-dihydroxy-2-methyl-5,9,11-trioxo-18-(sulfooxy)-8-azapentacyclo[10.8.0.0²,¹⁰.0⁶,¹⁰.0¹⁴,¹⁹]icosa-1(20),12,14,16,18-pentaen-8-yl]ethanesulfonic acid (BioDeep_00002231455)
Formula: C22H21NO12S2 (555.0505)
1.63 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000055065 Unreliable 556.0617 556.0614 ~ 556.0619
MzDiff: 2.2 ppm
Fluralaner (BioDeep_00000179159)
Formula: C22H17Cl2F6N3O3 (555.0551)
1.55 (100%) MALDI - DHB
[NOVOCELL:BACKGROUND] blank
MSI_000009350 Unavailable 556.0555 556.0555 ~ 556.0555
MzDiff: none
2-[(2s,6r,7r,10r)-7,15-dihydroxy-2-methyl-5,9,11-trioxo-18-(sulfooxy)-8-azapentacyclo[10.8.0.0²,¹⁰.0⁶,¹⁰.0¹⁴,¹⁹]icosa-1(20),12,14,16,18-pentaen-8-yl]ethanesulfonic acid (BioDeep_00002231455)
Formula: C22H21NO12S2 (555.0505)
-0.13 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000009545 Unavailable 556.047 556.047 ~ 556.047
MzDiff: none
5-Amino-1-[carboxy(methyl)amino]pentane-1,1,2,2,3,3,4,4,5-nonacarboxylic acid (BioDeep_00000185384)
Formula: C16H16N2O20 (556.0296)
-0.85 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000010212 Unavailable 556.0615 556.0615 ~ 556.0615
MzDiff: none
Fluralaner (BioDeep_00000179159)
Formula: C22H17Cl2F6N3O3 (555.0551)
-0.52 (100%) Bathymodiolus
[UBERON:0009120] gill filament
MSI_000050302 Unreliable 556.0517 556.0517 ~ 556.0517
MzDiff: none
5-Amino-1-[carboxy(methyl)amino]pentane-1,1,2,2,3,3,4,4,5-nonacarboxylic acid (BioDeep_00000185384)
Formula: C16H16N2O20 (556.0296)
0 (100%) Mytilus edulis
[UBERON:0009120] gill filament

Found 7 Sample Hits
Metabolite Species Sample
5-Amino-1-[carboxy(methyl)amino]pentane-1,1,2,2,3,3,4,4,5-nonacarboxylic acid

Formula: C16H16N2O20 (556.0296)
Adducts: [M-H2O+NH4]+ (Ppm: 10.6)
Mus musculus (Urinary bladder)
HR2MSI_mouse_urinary_bladder - S096
Resolution: 10μm, 260x134

Description

Mass spectrometry imaging of phospholipids in mouse urinary bladder (imzML dataset)
The spatial distribution of phospholipids in a tissue section of mouse urinary bladder was analyzed by MALDI MS imaging at 10 micrometer pixel size with high mass resolution (using an LTQ Orbitrap mass spectrometer).

R, ö, mpp A, Guenther S, Schober Y, Schulz O, Takats Z, Kummer W, Spengler B, Histology by mass spectrometry: label-free tissue characterization obtained from high-accuracy bioanalytical imaging. Angew Chem Int Ed Engl, 49(22):3834-8(2010)

Fig. S2: Single ion images of compounds shown in Fig. 1A-B : (upper left to lower right) m/z = 743.5482 (unknown), m/z = 741.5307 (SM (16:0), [M+K]+), m/z = 798.5410 (PC (34:1), [M+K]+), m/z = 616.1767 (heme b, M+), m/z = 772.5253 (PC (32:0), [M+K]+).

Stability of determined mass values was in the range of +/- 1 ppm over 22 hours of measurement (Fig. S4), with a standard deviation of 0.56 ppm. Accuracy data were obtained during tissue scanning experiments by monitoring the mass signal at nominal mass 798. The internal lock mass function of the Orbitrap instrument was used for automatic calibration during imaging measurements, using the known matrix-related ion signals at m/z = 137.0233, m/z = 444.0925 and m/z = 716.1246.

5-Amino-1-[carboxy(methyl)amino]pentane-1,1,2,2,3,3,4,4,5-nonacarboxylic acid

Formula: C16H16N2O20 (556.0296)
Adducts: [M-H2O+NH4]+ (Ppm: 9.2)
Mus musculus (Lung)
image3
Resolution: 40μm, 146x190

Description

Fig. 4 MALDI-MSI data of mouse lung tissue after administration with D9-choline and U13C-DPPC–containing Poractant alfa surfactant (labels administered 12 h prior to tissue collection). Ion images of (A) m/z 796.6856 ([U13C-DPPC+Na]+), (B) m/z 756.5154 [PC32:0+Na]+), and (C) m/z 765.6079 ([D9-PC32:0+Na]+). D: Overlay image of [U13C-PC32:0+Na]+ (red) and [D9-PC32:0+Na]+ (green). Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

Fluralaner

Formula: C22H17Cl2F6N3O3 (555.0551)
Adducts: [M+H]+ (Ppm: 0.7)
Mus musculus (Lung)
image4
Resolution: 40μm, 162x156

Description

Fig 6c Fig. 6 MALDI-MSI of U13C-PC16:0/16:0 acyl chain remodeling. A: Averaged MALDI mass spectrum from lung tissue collected from mice euthanized 12 h after administration of D9-choline and U13C-DPPC–containing Poractant alfa surfactant. The ion at m/z 828.6321 is assigned as the [M+Na]+ ion of 13C24-PC16:0_20:4 formed by acyl remodeling of U13C-PC16:0/16:0. The “NL” value refers to the intensity of the base peak in the full range MS1 spectrum. B: MS/MS spectrum of precursor ions at m/z 828.5 ± 0.5 with fragment ions originating from [13C24-PC16:0_20:4+Na]+ annotated. Part-per-million (ppm) mass errors are provided in parentheses. C, D: MALDI-MSI data of [U13C-DPPC+Na]+ (blue), [PC36:4+Na]+ (green) and [13C24-PC16:0_20:4+Na]+ (red) in lung tissue collected from mice (C) 12 h and (D) 18 h after label administration. All images were visualized using total-ion-current normalization and hotspot removal (high quantile = 99%). MS/MS, tandem mass spectrometry; MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

7-chloro-1,1',6,8,8'-pentahydroxy-3,3'-dimethyl-[2,2'-bianthracene]-9,9',10,10'-tetrone

Formula: C30H17ClO9 (556.0561)
Adducts: [M]+ (Ppm: 9.8)
Posidonia oceanica (root)
MS1_20180404_PO_1200
Resolution: 17μm, 193x208

Description

5-Amino-1-[carboxy(methyl)amino]pentane-1,1,2,2,3,3,4,4,5-nonacarboxylic acid

Formula: C16H16N2O20 (556.0296)
Adducts: [M-H2O+NH4]+ (Ppm: 0.7)
Mytilus edulis (mantle)
20190201_MS38_Crassostrea_Mantle_350-1500_DHB_pos_A28_10um_270x210
Resolution: 10μm, 270x210

Description

5-Amino-1-[carboxy(methyl)amino]pentane-1,1,2,2,3,3,4,4,5-nonacarboxylic acid

Formula: C16H16N2O20 (556.0296)
Adducts: [M-H2O+NH4]+ (Ppm: 2.2)
Mytilus edulis (gill)
20190202_MS38_Crassostrea_Gill_350-1500_DHB_pos_A25_11um_305x210
Resolution: 11μm, 305x210

Description

single cell layer class_4 is the gill structure cells, metabolite ion 534.2956 is the top representive ion of this type of cell

5-Amino-1-[carboxy(methyl)amino]pentane-1,1,2,2,3,3,4,4,5-nonacarboxylic acid

Formula: C16H16N2O20 (556.0296)
Adducts: [M-H2O+NH4]+ (Ppm: 1.6)
Mytilus edulis (mantle)
20190216_MS38_Mytilus_mantle_350-1500_DHB_pos_A26_10um_275x210
Resolution: 10μm, 275x210

Description