在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 14 Reference Ions Near m/z 545.0818
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000011187 Unreliable 545.0897 545.0897 ~ 545.0897
MzDiff: none
dTDP-3-methyl-4-oxo-2,6-dideoxy-L-allose (BioDeep_00000008957)
Formula: C17H26N2O14P2 (544.0859)
1.82 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000011188 Unreliable 545.0724 545.0724 ~ 545.0724
MzDiff: none
Eumelanins (BioDeep_00000178947)
Formula: C23H20N4O8S2 (544.0723)
1.82 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000011189 Unreliable 545.0818 545.0818 ~ 545.0818
MzDiff: none
Urolithin A 3,8-O-diglucuronide (BioDeep_00000036518)
Formula: C25H24O16 (580.1064)
1.82 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000009396 Unavailable 545.0897 545.0897 ~ 545.0897
MzDiff: none
dTDP-3-methyl-4-oxo-2,6-dideoxy-L-allose (BioDeep_00000008957)
Formula: C17H26N2O14P2 (544.0859)
-0.29 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000009444 Unavailable 545.0818 545.0818 ~ 545.0818
MzDiff: none
Urolithin A 3,8-O-diglucuronide (BioDeep_00000036518)
Formula: C25H24O16 (580.1064)
-0.44 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000009451 Unavailable 545.0724 545.0724 ~ 545.0724
MzDiff: none
Eumelanins (BioDeep_00000178947)
Formula: C23H20N4O8S2 (544.0723)
-0.46 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000000964 Unavailable 545.0897 545.0897 ~ 545.0897
MzDiff: none
dTDP-3-methyl-4-oxo-2,6-dideoxy-L-allose (BioDeep_00000008957)
Formula: C17H26N2O14P2 (544.0859)
-0.86 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000000978 Unavailable 545.0818 545.0818 ~ 545.0818
MzDiff: none
Urolithin A 3,8-O-diglucuronide (BioDeep_00000036518)
Formula: C25H24O16 (580.1064)
-0.87 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000000983 Unavailable 545.0724 545.0724 ~ 545.0724
MzDiff: none
Eumelanins (BioDeep_00000178947)
Formula: C23H20N4O8S2 (544.0723)
-0.88 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000012710 Unavailable 545.0731 545.0731 ~ 545.0731
MzDiff: none
Epitheaflavic acid 3'-gallate (BioDeep_00000025951)
Formula: C28H20O14 (580.0853)
-0.4 (100%) Plant
[PO:0005020] vascular bundle
MSI_000014137 Unavailable 545.0731 545.0731 ~ 545.0731
MzDiff: none
Epitheaflavic acid 3'-gallate (BioDeep_00000025951)
Formula: C28H20O14 (580.0853)
-0.34 (100%) Plant
[PO:0005417] phloem
MSI_000015014 Unavailable 545.0731 545.0731 ~ 545.0731
MzDiff: none
Epitheaflavic acid 3'-gallate (BioDeep_00000025951)
Formula: C28H20O14 (580.0853)
-0.52 (100%) Plant
[PO:0006036] root epidermis
MSI_000018331 Unreliable 545.0731 545.0731 ~ 545.0731
MzDiff: none
Epitheaflavic acid 3'-gallate (BioDeep_00000025951)
Formula: C28H20O14 (580.0853)
1.78 (100%) Plant
[PO:0020124] root stele
MSI_000020070 Unavailable 545.0731 545.0731 ~ 545.0731
MzDiff: none
Epitheaflavic acid 3'-gallate (BioDeep_00000025951)
Formula: C28H20O14 (580.0853)
-0.52 (100%) Plant
[PO:0025197] stele

Found 3 Sample Hits
Metabolite Species Sample
Urolithin A 3,8-O-diglucuronide

Formula: C25H24O16 (580.1064)
Adducts: [M+H-2H2O]+ (Ppm: 19.8)
Mus musculus (Urinary bladder)
HR2MSI_mouse_urinary_bladder - S096
Resolution: 10μm, 260x134

Description

Mass spectrometry imaging of phospholipids in mouse urinary bladder (imzML dataset)
The spatial distribution of phospholipids in a tissue section of mouse urinary bladder was analyzed by MALDI MS imaging at 10 micrometer pixel size with high mass resolution (using an LTQ Orbitrap mass spectrometer).

R, ö, mpp A, Guenther S, Schober Y, Schulz O, Takats Z, Kummer W, Spengler B, Histology by mass spectrometry: label-free tissue characterization obtained from high-accuracy bioanalytical imaging. Angew Chem Int Ed Engl, 49(22):3834-8(2010)

Fig. S2: Single ion images of compounds shown in Fig. 1A-B : (upper left to lower right) m/z = 743.5482 (unknown), m/z = 741.5307 (SM (16:0), [M+K]+), m/z = 798.5410 (PC (34:1), [M+K]+), m/z = 616.1767 (heme b, M+), m/z = 772.5253 (PC (32:0), [M+K]+).

Stability of determined mass values was in the range of +/- 1 ppm over 22 hours of measurement (Fig. S4), with a standard deviation of 0.56 ppm. Accuracy data were obtained during tissue scanning experiments by monitoring the mass signal at nominal mass 798. The internal lock mass function of the Orbitrap instrument was used for automatic calibration during imaging measurements, using the known matrix-related ion signals at m/z = 137.0233, m/z = 444.0925 and m/z = 716.1246.

m/z_545.0761

Formula: - (n/a)
Adducts: (Ppm: 0)
Mus musculus (Lung)
image3
Resolution: 40μm, 146x190

Description

Fig. 4 MALDI-MSI data of mouse lung tissue after administration with D9-choline and U13C-DPPC–containing Poractant alfa surfactant (labels administered 12 h prior to tissue collection). Ion images of (A) m/z 796.6856 ([U13C-DPPC+Na]+), (B) m/z 756.5154 [PC32:0+Na]+), and (C) m/z 765.6079 ([D9-PC32:0+Na]+). D: Overlay image of [U13C-PC32:0+Na]+ (red) and [D9-PC32:0+Na]+ (green). Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

Eumelanins

Formula: C23H20N4O8S2 (544.0723)
Adducts: [M+H]+ (Ppm: 15.1)
Mus musculus (Lung)
image2
Resolution: 40μm, 550x256

Description

Supplementary Figure S6. Ion distribution images for (a) [PC36:4+Na]+ (m/z 804.5514) and (b) [PC38:6+Na]+ (m/z 828.5515) obtained from mouse lung tissue collected 6 h after administration of D9- choline and U13C-DPPC–containing CHF5633. Parts-per-million (ppm) mass errors are indicated in parentheses. (c) Magnification of the boxed region in (a) with selected bronchiolar regions outlined in white boxes. (d) The corresponding H&E-stained tissue section with the same selected bronchiolar regions outlined in black boxes. These data demonstrate the co-localisation of the polyunsaturated lipids PC36:4 and PC38:6 with the bronchiolar regions of the lung. All MSI images were visualised using total ion current normalisation and hotspot removal (high quantile = 99%).