在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 29 Reference Ions Near m/z 519.1003
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000032192 Unreliable 519.1006 519.1003 ~ 519.1008
MzDiff: 1.9 ppm
(2'r,3r)-4',6,6'-trihydroxy-2'-(4-hydroxyphenyl)-4-[(1e)-2-(4-hydroxyphenyl)ethenyl]-2'h-3,3'-spirobi[[1]benzofuran]-2-one (BioDeep_00002058207)
Formula: C29H20O8 (496.1158)
3.86 (50%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000025626 Unreliable 519.1003 519.1003 ~ 519.1003
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
2.28 (100%) Mus musculus
[UBERON:0000913] interstitial fluid
MSI_000032201 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000033756 Unreliable 519.093 519.093 ~ 519.093
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
0.69 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000033777 Unreliable 519.1003 519.1003 ~ 519.1003
MzDiff: none
(2'r,3r)-4',6,6'-trihydroxy-2'-(4-hydroxyphenyl)-4-[(1e)-2-(4-hydroxyphenyl)ethenyl]-2'h-3,3'-spirobi[[1]benzofuran]-2-one (BioDeep_00002058207)
Formula: C29H20O8 (496.1158)
0.65 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000035551 Unavailable 519.093 519.093 ~ 519.093
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
-0.09 (100%) Posidonia oceanica
[PO:0006203] pericycle
MSI_000035624 Unavailable 519.1003 519.1003 ~ 519.1003
MzDiff: none
(2'r,3r)-4',6,6'-trihydroxy-2'-(4-hydroxyphenyl)-4-[(1e)-2-(4-hydroxyphenyl)ethenyl]-2'h-3,3'-spirobi[[1]benzofuran]-2-one (BioDeep_00002058207)
Formula: C29H20O8 (496.1158)
-0.2 (100%) Posidonia oceanica
[PO:0006203] pericycle
MSI_000044916 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000046853 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000047894 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000048508 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000049518 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000050482 Unreliable 519.1051 519.1051 ~ 519.1051
MzDiff: none
6'-Malonylgenistin (BioDeep_00000003686)
Formula: C24H22O13 (518.106)
0 (100%) Mytilus edulis
[UBERON:0009120] gill filament
MSI_000051482 Unreliable 519.1051 519.1051 ~ 519.1051
MzDiff: none
6'-Malonylgenistin (BioDeep_00000003686)
Formula: C24H22O13 (518.106)
0 (100%) Mytilus edulis
[UBERON:2001856] gill ray
MSI_000051528 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000052644 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000056395 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000057728 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000057935 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000058223 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000058395 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000061076 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000062911 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000063067 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000063474 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000063677 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000064728 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000065028 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000065986 Unreliable 519.0941 519.0941 ~ 519.0941
MzDiff: none
Sagecoumarin (BioDeep_00000021778)
Formula: C27H20O12 (536.0955)
1.5 (100%) Posidonia oceanica
[PO:0005020] vascular bundle

Found 6 Sample Hits
Metabolite Species Sample
Sagecoumarin

Formula: C27H20O12 (536.0955)
Adducts: [M+H-H2O]+ (Ppm: 16.4)
Homo sapiens (Liver)
20171107_FIT4_DHBpos_p70_s50
Resolution: 50μm, 70x70

Description

Sagecoumarin

Formula: C27H20O12 (536.0955)
Adducts: [M+H-H2O]+ (Ppm: 15.6)
Mus musculus (Lung)
image1
Resolution: 40μm, 187x165

Description

Fig. 2 MALDI-MSI data from the same mouse lung tissue analyzed in Fig. 1. A: Optical image of the post-MSI, H&E-stained tissue section. B–D, F–G: Ion images of (B) m/z 796.6855 ([U13C-DPPC+Na]+), (C) m/z 756.5514 ([PC32:0+Na]+), (D) m/z 765.6079 ([D9-PC32:0+Na]+), (F) m/z 754.5359 ([PC32:1+Na]+), and (G) m/z 763.5923 ([D9-PC32:1+Na]+). E, H: Ratio images of (E) [D9-PC32:0+Na]+:[PC32:0+Na]+ and (H) [D9-PC32:1+Na]+:[PC32:1+Na]+. Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. U13C-DPPC, universally 13C-labeled dipalmitoyl PC; PC, phosphatidylcholine; MSI, mass spectrometry imaging; H&E, hematoxylin and eosin. Fig 1-3, Fig S1-S3, S5

Sagecoumarin

Formula: C27H20O12 (536.0955)
Adducts: [M+H-H2O]+ (Ppm: 16.6)
Mus musculus (Lung)
image2
Resolution: 40μm, 550x256

Description

Supplementary Figure S6. Ion distribution images for (a) [PC36:4+Na]+ (m/z 804.5514) and (b) [PC38:6+Na]+ (m/z 828.5515) obtained from mouse lung tissue collected 6 h after administration of D9- choline and U13C-DPPC–containing CHF5633. Parts-per-million (ppm) mass errors are indicated in parentheses. (c) Magnification of the boxed region in (a) with selected bronchiolar regions outlined in white boxes. (d) The corresponding H&E-stained tissue section with the same selected bronchiolar regions outlined in black boxes. These data demonstrate the co-localisation of the polyunsaturated lipids PC36:4 and PC38:6 with the bronchiolar regions of the lung. All MSI images were visualised using total ion current normalisation and hotspot removal (high quantile = 99%).

(2'r,3r)-4',6,6'-trihydroxy-2'-(4-hydroxyphenyl)-4-[(1e)-2-(4-hydroxyphenyl)ethenyl]-2'h-3,3'-spirobi[[1]benzofuran]-2-one

Formula: C29H20O8 (496.1158)
Adducts: [M+Na]+ (Ppm: 9.1)
Posidonia oceanica (root)
20190614_MS1_A19r-20
Resolution: 17μm, 262x276

Description

Seagrasses are one of the most efficient natural sinks of carbon dioxide (CO2) on Earth. Despite covering less than 0.1% of coastal regions, they have the capacity to bury up to 10% of marine organic matter and can bury the same amount of carbon 35 times faster than tropical rainforests. On land, the soil’s ability to sequestrate carbon is intimately linked to microbial metabolism. Despite the growing attention to the link between plant production, microbial communities, and the carbon cycle in terrestrial ecosystems, these processes remain enigmatic in the sea. Here, we show that seagrasses excrete organic sugars, namely in the form of sucrose, into their rhizospheres. Surprisingly, the microbial communities living underneath meadows do not fully use this sugar stock in their metabolism. Instead, sucrose piles up in the sediments to mM concentrations underneath multiple types of seagrass meadows. Sediment incubation experiments show that microbial communities living underneath a meadow use sucrose at low metabolic rates. Our metagenomic analyses revealed that the distinct community of microorganisms occurring underneath meadows is limited in their ability to degrade simple sugars, which allows these compounds to persist in the environment over relatively long periods of time. Our findings reveal how seagrasses form blue carbon stocks despite the relatively small area they occupy. Unfortunately, anthropogenic disturbances are threatening the long-term persistence of seagrass meadows. Given that these sediments contain a large stock of sugars that heterotopic bacteria can degrade, it is even more important to protect these ecosystems from degradation.

5,7-dihydroxy-2-(4-{2-hydroxy-5-[(2s)-5-hydroxy-7-methoxy-4-oxo-2,3-dihydro-1-benzopyran-2-yl]phenoxy}phenyl)chromen-4-one

Formula: C31H22O10 (554.1213)
Adducts: [M+H-2H2O]+ (Ppm: 12.8)
Posidonia oceanica (root)
MS1_20180404_PO_1200
Resolution: 17μm, 193x208

Description

6'-Malonylgenistin

Formula: C24H22O13 (518.106)
Adducts: [M+H]+ (Ppm: 15.8)
Mytilus edulis (gill)
20190202_MS38_Crassostrea_Gill_350-1500_DHB_pos_A25_11um_305x210
Resolution: 11μm, 305x210

Description

single cell layer class_4 is the gill structure cells, metabolite ion 534.2956 is the top representive ion of this type of cell