在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 14 Reference Ions Near m/z 428.9232
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000063378 Unavailable 428.9315 428.9315 ~ 428.9315
MzDiff: none
Not Annotated -0.32 (0%) Mus musculus
[UBERON:0000956] cerebral cortex
MSI_000011628 Unavailable 428.9268 428.9268 ~ 428.9268
MzDiff: none
methyl 3,4-dibromo-12-imino-7-oxo-5,8,11,13-tetraazatricyclo[8.4.0.0²,⁶]tetradeca-1(10),2(6),3,13-tetraene-14-carboxylate (BioDeep_00002069040)
Formula: C12H9Br2N5O3 (428.9072)
-1.59 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000009351 Unavailable 428.9268 428.9268 ~ 428.9268
MzDiff: none
methyl 3,4-dibromo-12-imino-7-oxo-5,8,11,13-tetraazatricyclo[8.4.0.0²,⁶]tetradeca-1(10),2(6),3,13-tetraene-14-carboxylate (BioDeep_00002069040)
Formula: C12H9Br2N5O3 (428.9072)
-0.13 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000060352 Unreliable 428.9315 428.9315 ~ 428.9315
MzDiff: 0.1 ppm
Not Annotated 0.02 (0%) Mus musculus
[UBERON:0002421] hippocampal formation
MSI_000062950 Unreliable 428.9327 428.9327 ~ 428.9327
MzDiff: none
Not Annotated 0.56 (0%) Mus musculus
[UBERON:0000956] cerebral cortex
MSI_000000665 Unavailable 428.9268 428.9268 ~ 428.9268
MzDiff: none
methyl 3,4-dibromo-12-imino-7-oxo-5,8,11,13-tetraazatricyclo[8.4.0.0²,⁶]tetradeca-1(10),2(6),3,13-tetraene-14-carboxylate (BioDeep_00002069040)
Formula: C12H9Br2N5O3 (428.9072)
-0.54 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000001320 Unavailable 428.9293 428.9293 ~ 428.9293
MzDiff: none
methyl 3,4-dibromo-12-imino-7-oxo-5,8,11,13-tetraazatricyclo[8.4.0.0²,⁶]tetradeca-1(10),2(6),3,13-tetraene-14-carboxylate (BioDeep_00002069040)
Formula: C12H9Br2N5O3 (428.9072)
-0.58 (100%) Mus musculus
[UBERON:0001224] renal pelvis
MSI_000001789 Unavailable 428.9293 428.9293 ~ 428.9293
MzDiff: none
methyl 3,4-dibromo-12-imino-7-oxo-5,8,11,13-tetraazatricyclo[8.4.0.0²,⁶]tetradeca-1(10),2(6),3,13-tetraene-14-carboxylate (BioDeep_00002069040)
Formula: C12H9Br2N5O3 (428.9072)
-0.59 (100%) Mus musculus
[UBERON:0001225] cortex of kidney
MSI_000002250 Unavailable 428.9293 428.9293 ~ 428.9293
MzDiff: none
methyl 3,4-dibromo-12-imino-7-oxo-5,8,11,13-tetraazatricyclo[8.4.0.0²,⁶]tetradeca-1(10),2(6),3,13-tetraene-14-carboxylate (BioDeep_00002069040)
Formula: C12H9Br2N5O3 (428.9072)
-0.59 (100%) Mus musculus
[UBERON:0001293] outer medulla of kidney
MSI_000032115 Unreliable 428.9167 428.9167 ~ 428.9167
MzDiff: none
1-[4-bromo-5-(iodomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate (BioDeep_00002134884)
Formula: C12H16BrIO5 (445.9226)
2.4 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000034665 Unreliable 428.9167 428.9167 ~ 428.9167
MzDiff: none
1-[4-bromo-5-(iodomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate (BioDeep_00002134884)
Formula: C12H16BrIO5 (445.9226)
0.24 (100%) Posidonia oceanica
[PO:0006036] root epidermis
MSI_000038321 Unreliable 428.9178 428.9178 ~ 428.9178
MzDiff: none
1-[4-bromo-5-(iodomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate (BioDeep_00002134884)
Formula: C12H16BrIO5 (445.9226)
1.38 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000058781 Unreliable 428.9323 428.9323 ~ 428.9323
MzDiff: none
Not Annotated 0.87 (0%) Mus musculus
[UBERON:0001950] neocortex
MSI_000060155 Unavailable 428.9323 428.9323 ~ 428.9323
MzDiff: none
Not Annotated -1.09 (0%) Mus musculus
[UBERON:0002298] brainstem

Found 8 Sample Hits
Metabolite Species Sample
methyl 3,4-dibromo-12-imino-7-oxo-5,8,11,13-tetraazatricyclo[8.4.0.0²,⁶]tetradeca-1(10),2(6),3,13-tetraene-14-carboxylate

Formula: C12H9Br2N5O3 (428.9072)
Adducts: [M-H2O+NH4]+ (Ppm: 8.6)
Mus musculus (Urinary bladder)
HR2MSI_mouse_urinary_bladder - S096
Resolution: 10μm, 260x134

Description

Mass spectrometry imaging of phospholipids in mouse urinary bladder (imzML dataset)
The spatial distribution of phospholipids in a tissue section of mouse urinary bladder was analyzed by MALDI MS imaging at 10 micrometer pixel size with high mass resolution (using an LTQ Orbitrap mass spectrometer).

R, ö, mpp A, Guenther S, Schober Y, Schulz O, Takats Z, Kummer W, Spengler B, Histology by mass spectrometry: label-free tissue characterization obtained from high-accuracy bioanalytical imaging. Angew Chem Int Ed Engl, 49(22):3834-8(2010)

Fig. S2: Single ion images of compounds shown in Fig. 1A-B : (upper left to lower right) m/z = 743.5482 (unknown), m/z = 741.5307 (SM (16:0), [M+K]+), m/z = 798.5410 (PC (34:1), [M+K]+), m/z = 616.1767 (heme b, M+), m/z = 772.5253 (PC (32:0), [M+K]+).

Stability of determined mass values was in the range of +/- 1 ppm over 22 hours of measurement (Fig. S4), with a standard deviation of 0.56 ppm. Accuracy data were obtained during tissue scanning experiments by monitoring the mass signal at nominal mass 798. The internal lock mass function of the Orbitrap instrument was used for automatic calibration during imaging measurements, using the known matrix-related ion signals at m/z = 137.0233, m/z = 444.0925 and m/z = 716.1246.

methyl 3,4-dibromo-12-imino-7-oxo-5,8,11,13-tetraazatricyclo[8.4.0.0²,⁶]tetradeca-1(10),2(6),3,13-tetraene-14-carboxylate

Formula: C12H9Br2N5O3 (428.9072)
Adducts: [M-H2O+NH4]+ (Ppm: 2.7)
Mus musculus (Kidney)
FULL_MS_centriod_CHCA_20210819
Resolution: 17μm, 638x437

Description

AP-MALDI instrument demo test, mass spectrum scan in centroid mode.

3,5-Diiodosalicylic acid

Formula: C7H4I2O3 (389.825)
Adducts: [M+K]+ (Ppm: 1.3)
Mus musculus (Lung)
image2
Resolution: 40μm, 550x256

Description

Supplementary Figure S6. Ion distribution images for (a) [PC36:4+Na]+ (m/z 804.5514) and (b) [PC38:6+Na]+ (m/z 828.5515) obtained from mouse lung tissue collected 6 h after administration of D9- choline and U13C-DPPC–containing CHF5633. Parts-per-million (ppm) mass errors are indicated in parentheses. (c) Magnification of the boxed region in (a) with selected bronchiolar regions outlined in white boxes. (d) The corresponding H&E-stained tissue section with the same selected bronchiolar regions outlined in black boxes. These data demonstrate the co-localisation of the polyunsaturated lipids PC36:4 and PC38:6 with the bronchiolar regions of the lung. All MSI images were visualised using total ion current normalisation and hotspot removal (high quantile = 99%).

1-[4-bromo-5-(iodomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate

Formula: C12H16BrIO5 (445.9226)
Adducts: [M+H-H2O]+ (Ppm: 10.7)
Mytilus edulis (mantle)
20190201_MS38_Crassostrea_Mantle_350-1500_DHB_pos_A28_10um_270x210
Resolution: 10μm, 270x210

Description

1-[4-bromo-5-(iodomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate

Formula: C12H16BrIO5 (445.9226)
Adducts: [M+H-H2O]+ (Ppm: 9.1)
Mytilus edulis (gill)
20190202_MS38_Crassostrea_Gill_350-1500_DHB_pos_A25_11um_305x210
Resolution: 11μm, 305x210

Description

single cell layer class_4 is the gill structure cells, metabolite ion 534.2956 is the top representive ion of this type of cell

1-[4-bromo-5-(iodomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate

Formula: C12H16BrIO5 (445.9226)
Adducts: [M+H-H2O]+ (Ppm: 10)
Mytilus edulis (mantle)
20190216_MS38_Mytilus_mantle_350-1500_DHB_pos_A26_10um_275x210
Resolution: 10μm, 275x210

Description

m/z_428.9323

Formula: - (n/a)
Adducts: (Ppm: 0)
Mus musculus (brain)
Brain01_Bregma-3-88b_centroid
Resolution: 17μm, 265x320

Description

m/z_428.9315

Formula: - (n/a)
Adducts: (Ppm: 0)
Mus musculus (brain)
Brain02_Bregma1-42_03
Resolution: 17μm, 483x403

Description