在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 6 Reference Ions Near m/z 428.9167
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000011627 Unavailable 428.9107 428.9107 ~ 428.9107
MzDiff: none
(2s,3r,4s,6s)-3-chloro-2-(dibromomethyl)-2-hydroxy-6-propyloxan-4-yl acetate (BioDeep_00002148270)
Formula: C11H17Br2ClO4 (405.9182)
-1.59 (100%) Mus musculus
[UBERON:0012378] muscle layer of urinary bladder
MSI_000009354 Unavailable 428.9107 428.9107 ~ 428.9107
MzDiff: none
(2s,3r,4s,6s)-3-chloro-2-(dibromomethyl)-2-hydroxy-6-propyloxan-4-yl acetate (BioDeep_00002148270)
Formula: C11H17Br2ClO4 (405.9182)
-0.15 (100%) Mus musculus
[UBERON:0004645] urinary bladder urothelium
MSI_000000536 Unavailable 428.9107 428.9107 ~ 428.9107
MzDiff: none
(2s,3r,4s,6s)-3-chloro-2-(dibromomethyl)-2-hydroxy-6-propyloxan-4-yl acetate (BioDeep_00002148270)
Formula: C11H17Br2ClO4 (405.9182)
-0.38 (100%) Mus musculus
[CL:0000066] epithelial cell
MSI_000032115 Unreliable 428.9167 428.9167 ~ 428.9167
MzDiff: none
1-[4-bromo-5-(iodomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate (BioDeep_00002134884)
Formula: C12H16BrIO5 (445.9226)
2.4 (100%) Posidonia oceanica
[PO:0005020] vascular bundle
MSI_000034665 Unreliable 428.9167 428.9167 ~ 428.9167
MzDiff: none
1-[4-bromo-5-(iodomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate (BioDeep_00002134884)
Formula: C12H16BrIO5 (445.9226)
0.24 (100%) Posidonia oceanica
[PO:0006036] root epidermis
MSI_000038321 Unreliable 428.9178 428.9178 ~ 428.9178
MzDiff: none
1-[4-bromo-5-(iodomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate (BioDeep_00002134884)
Formula: C12H16BrIO5 (445.9226)
1.38 (100%) Posidonia oceanica
[PO:0005020] vascular bundle

Found 6 Sample Hits
Metabolite Species Sample
3,5-Diiodosalicylic acid

Formula: C7H4I2O3 (389.825)
Adducts: [M+K]+ (Ppm: 1.3)
Mus musculus (Lung)
image2
Resolution: 40μm, 550x256

Description

Supplementary Figure S6. Ion distribution images for (a) [PC36:4+Na]+ (m/z 804.5514) and (b) [PC38:6+Na]+ (m/z 828.5515) obtained from mouse lung tissue collected 6 h after administration of D9- choline and U13C-DPPC–containing CHF5633. Parts-per-million (ppm) mass errors are indicated in parentheses. (c) Magnification of the boxed region in (a) with selected bronchiolar regions outlined in white boxes. (d) The corresponding H&E-stained tissue section with the same selected bronchiolar regions outlined in black boxes. These data demonstrate the co-localisation of the polyunsaturated lipids PC36:4 and PC38:6 with the bronchiolar regions of the lung. All MSI images were visualised using total ion current normalisation and hotspot removal (high quantile = 99%).

1-[4-bromo-5-(iodomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate

Formula: C12H16BrIO5 (445.9226)
Adducts: [M+H-H2O]+ (Ppm: 6)
Posidonia oceanica (root)
20190614_MS1_A19r-20
Resolution: 17μm, 262x276

Description

Seagrasses are one of the most efficient natural sinks of carbon dioxide (CO2) on Earth. Despite covering less than 0.1% of coastal regions, they have the capacity to bury up to 10% of marine organic matter and can bury the same amount of carbon 35 times faster than tropical rainforests. On land, the soil’s ability to sequestrate carbon is intimately linked to microbial metabolism. Despite the growing attention to the link between plant production, microbial communities, and the carbon cycle in terrestrial ecosystems, these processes remain enigmatic in the sea. Here, we show that seagrasses excrete organic sugars, namely in the form of sucrose, into their rhizospheres. Surprisingly, the microbial communities living underneath meadows do not fully use this sugar stock in their metabolism. Instead, sucrose piles up in the sediments to mM concentrations underneath multiple types of seagrass meadows. Sediment incubation experiments show that microbial communities living underneath a meadow use sucrose at low metabolic rates. Our metagenomic analyses revealed that the distinct community of microorganisms occurring underneath meadows is limited in their ability to degrade simple sugars, which allows these compounds to persist in the environment over relatively long periods of time. Our findings reveal how seagrasses form blue carbon stocks despite the relatively small area they occupy. Unfortunately, anthropogenic disturbances are threatening the long-term persistence of seagrass meadows. Given that these sediments contain a large stock of sugars that heterotopic bacteria can degrade, it is even more important to protect these ecosystems from degradation.

1-[4-bromo-5-(iodomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate

Formula: C12H16BrIO5 (445.9226)
Adducts: [M+H-H2O]+ (Ppm: 3.5)
Posidonia oceanica (root)
20190613_MS1_A19r-18
Resolution: 17μm, 246x264

Description

m/z_428.9178

Formula: - (n/a)
Adducts: (Ppm: 0)
Mytilus edulis (mantle)
20190201_MS38_Crassostrea_Mantle_350-1500_DHB_pos_A28_10um_270x210
Resolution: 10μm, 270x210

Description

m/z_428.9172

Formula: - (n/a)
Adducts: (Ppm: 0)
Mytilus edulis (gill)
20190202_MS38_Crassostrea_Gill_350-1500_DHB_pos_A25_11um_305x210
Resolution: 11μm, 305x210

Description

single cell layer class_4 is the gill structure cells, metabolite ion 534.2956 is the top representive ion of this type of cell

m/z_428.9175

Formula: - (n/a)
Adducts: (Ppm: 0)
Mytilus edulis (mantle)
20190216_MS38_Mytilus_mantle_350-1500_DHB_pos_A26_10um_275x210
Resolution: 10μm, 275x210

Description