在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 8 Reference Ions Near m/z 393.3037
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000007123 Unreliable 393.3102 393.3101 ~ 393.3102
MzDiff: 0.2 ppm
gamma-Tocotrienol (BioDeep_00000395484)
Formula: C28H42O2 (410.3185)
4.44 (100%) Rattus norvegicus
[UBERON:0004359] corpus epididymis
MSI_000007301 Unreliable 393.3045 393.3044 ~ 393.3046
MzDiff: 0.7 ppm
Deoxycholic acid (BioDeep_00000000113)
Formula: C24H40O4 (392.2926)
4.73 (50%) Rattus norvegicus
[UBERON:0004359] corpus epididymis
MSI_000020490 Unreliable 393.2968 393.2967 ~ 393.2969
MzDiff: 1.0 ppm
3,5-Dihydroxydodecanoylcarnitine (BioDeep_00000170598)
Formula: C19H37NO6 (375.2621)
5.04 (50%) Rattus norvegicus
[UBERON:0004359] corpus epididymis
MSI_000026198 Unreliable 393.2971 393.2971 ~ 393.2973
MzDiff: 0.8 ppm
Ursodeoxycholate (BioDeep_00000000066)
Formula: C24H40O4 (392.2926)
2.24 (100%) Mus musculus
[UBERON:0000913] interstitial fluid
MSI_000007366 393.2987 393.2987 ~ 393.2987
MzDiff: none
Ursodeoxycholate (BioDeep_00000000066)
Formula: C24H40O4 (392.2926)
2.26 (100%) Rattus norvegicus
[UBERON:0004359] corpus epididymis
MSI_000020994 Unreliable 393.3118 393.3118 ~ 393.3118
MzDiff: none
gamma-Tocotrienol (BioDeep_00000395484)
Formula: C28H42O2 (410.3185)
2.41 (100%) Rattus norvegicus
[UBERON:0004359] corpus epididymis
MSI_000003748 Unreliable 393.2989 393.2989 ~ 393.2989
MzDiff: none
Ursodeoxycholate (BioDeep_00000000066)
Formula: C24H40O4 (392.2926)
1.69 (100%) Homo sapiens
[UBERON:0002107] liver
MSI_000028293 Unreliable 393.2961 393.2961 ~ 393.2961
MzDiff: none
Ursodeoxycholate (BioDeep_00000000066)
Formula: C24H40O4 (392.2926)
1.48 (100%) Macropus giganteus
[UBERON:0001891] midbrain

Found 14 Sample Hits
Metabolite Species Sample
gamma-Tocotrienol

Formula: C28H42O2 (410.3185)
Adducts: [M+H-H2O]+ (Ppm: 17.2)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito03_18
Resolution: 17μm, 208x104

Description

m/z_393.3046

Formula: - (n/a)
Adducts: (Ppm: 0)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_44
Resolution: 17μm, 299x111

Description

Deoxycholic acid

Formula: C24H40O4 (392.2926)
Adducts: [M+H]+ (Ppm: 1.7)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_46
Resolution: 17μm, 298x106

Description

Deoxycholic acid

Formula: C24H40O4 (392.2926)
Adducts: [M+H]+ (Ppm: 6.3)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_47
Resolution: 17μm, 301x111

Description

Deoxycholic acid

Formula: C24H40O4 (392.2926)
Adducts: [M+H]+ (Ppm: 11.4)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_48
Resolution: 17μm, 294x107

Description

Ursodeoxycholate

Formula: C24H40O4 (392.2926)
Adducts: [M+H]+ (Ppm: 3.6)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_04
Resolution: 17μm, 178x91

Description

gamma-Tocotrienol

Formula: C28H42O2 (410.3185)
Adducts: [M+H-H2O]+ (Ppm: 18.5)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_04
Resolution: 17μm, 178x91

Description

Deoxycholic acid

Formula: C24H40O4 (392.2926)
Adducts: [M+H]+ (Ppm: 2.2)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_03
Resolution: 17μm, 159x110

Description

Auda

Formula: C23H40N2O3 (392.3039)
Adducts: [M+H]+ (Ppm: 8.8)
Rattus norvegicus (normal)
epik_dhb_head_ito01_05
Resolution: 17μm, 183x105

Description

Deoxycholic acid

Formula: C24H40O4 (392.2926)
Adducts: [M+H]+ (Ppm: 10.9)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_06
Resolution: 17μm, 183x103

Description

undecylprodigiosin

Formula: C25H35N3O (393.278)
Adducts: [M-H2O+NH4]+ (Ppm: 6.2)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito03_14
Resolution: 17μm, 205x103

Description

Ursodeoxycholate

Formula: C24H40O4 (392.2926)
Adducts: [M+H]+ (Ppm: 8.2)
Mus musculus (Lung)
image4
Resolution: 40μm, 162x156

Description

Fig 6c Fig. 6 MALDI-MSI of U13C-PC16:0/16:0 acyl chain remodeling. A: Averaged MALDI mass spectrum from lung tissue collected from mice euthanized 12 h after administration of D9-choline and U13C-DPPC–containing Poractant alfa surfactant. The ion at m/z 828.6321 is assigned as the [M+Na]+ ion of 13C24-PC16:0_20:4 formed by acyl remodeling of U13C-PC16:0/16:0. The “NL” value refers to the intensity of the base peak in the full range MS1 spectrum. B: MS/MS spectrum of precursor ions at m/z 828.5 ± 0.5 with fragment ions originating from [13C24-PC16:0_20:4+Na]+ annotated. Part-per-million (ppm) mass errors are provided in parentheses. C, D: MALDI-MSI data of [U13C-DPPC+Na]+ (blue), [PC36:4+Na]+ (green) and [13C24-PC16:0_20:4+Na]+ (red) in lung tissue collected from mice (C) 12 h and (D) 18 h after label administration. All images were visualized using total-ion-current normalization and hotspot removal (high quantile = 99%). MS/MS, tandem mass spectrometry; MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

Auda

Formula: C23H40N2O3 (392.3039)
Adducts: [M+H]+ (Ppm: 9)
Mus musculus (Lung)
image5
Resolution: 40μm, 163x183

Description

Supplementary Figure S8. MALDI-MSI data of mouse lung tissue administered with D9-choline and U 13C-DPPC–containing Poractant alfa surfactant (labels administered 18 h prior to sacrifice). Ion images of (a) m/z 796.6856 ([U13C-DPPC+Na]+), (b) m/z 756.5154 [PC32:0+Na]+ and (c) m/z 765.6079 ([D9-PC32:0+Na]+). (d) Overlay image of [U13C-DPPC+Na]+ (red) and [D9-PC32:0+Na]+ (green). Parts per million (ppm) mass errors are indicated in parentheses. All images were visualised using totalion-current normalisation and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0.

Ursodeoxycholate

Formula: C24H40O4 (392.2926)
Adducts: [M+H]+ (Ppm: 6.7)
Mus musculus (Lung)
image2
Resolution: 40μm, 550x256

Description

Supplementary Figure S6. Ion distribution images for (a) [PC36:4+Na]+ (m/z 804.5514) and (b) [PC38:6+Na]+ (m/z 828.5515) obtained from mouse lung tissue collected 6 h after administration of D9- choline and U13C-DPPC–containing CHF5633. Parts-per-million (ppm) mass errors are indicated in parentheses. (c) Magnification of the boxed region in (a) with selected bronchiolar regions outlined in white boxes. (d) The corresponding H&E-stained tissue section with the same selected bronchiolar regions outlined in black boxes. These data demonstrate the co-localisation of the polyunsaturated lipids PC36:4 and PC38:6 with the bronchiolar regions of the lung. All MSI images were visualised using total ion current normalisation and hotspot removal (high quantile = 99%).