在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 10 Reference Ions Near m/z 377.0691
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000015840 Unreliable 377.0691 377.0691 ~ 377.0691
MzDiff: 0.1 ppm
Sinigrin (BioDeep_00000003569)
Formula: C10H17NO9S2 (359.0345)
3.26 (100%) Vitis vinifera
[PO:0009085] exocarp
MSI_000053650 Unreliable 377.0624 377.0622 ~ 377.0628
MzDiff: 2.4 ppm
Sinigrin (BioDeep_00000003569)
Formula: C10H17NO9S2 (359.0345)
6.24 (80%) MALDI - CHCA
[NOVOCELL:BACKGROUND] blank
MSI_000054956 Unreliable 377.0631 377.0631 ~ 377.0631
MzDiff: none
5-Carboxyfluorescein (BioDeep_00000174677)
Formula: C21H12O7 (376.0583)
1.6 (100%) MALDI - DHB
[NOVOCELL:BACKGROUND] blank
MSI_000012811 Unavailable 377.0624 377.0624 ~ 377.0624
MzDiff: none
5-Carboxyfluorescein (BioDeep_00000174677)
Formula: C21H12O7 (376.0583)
-0.48 (100%) Plant
[PO:0005020] vascular bundle
MSI_000014129 Unavailable 377.0624 377.0624 ~ 377.0624
MzDiff: none
5-Carboxyfluorescein (BioDeep_00000174677)
Formula: C21H12O7 (376.0583)
-0.33 (100%) Plant
[PO:0005417] phloem
MSI_000014902 Unavailable 377.0624 377.0624 ~ 377.0624
MzDiff: none
5-Carboxyfluorescein (BioDeep_00000174677)
Formula: C21H12O7 (376.0583)
-0.49 (100%) Plant
[PO:0006036] root epidermis
MSI_000016335 Unreliable 377.0689 377.0689 ~ 377.0689
MzDiff: none
Sinigrin (BioDeep_00000003569)
Formula: C10H17NO9S2 (359.0345)
1.57 (100%) Vitis vinifera
[PO:0009086] endocarp
MSI_000018293 Unreliable 377.0624 377.0624 ~ 377.0624
MzDiff: none
5-Carboxyfluorescein (BioDeep_00000174677)
Formula: C21H12O7 (376.0583)
1.78 (100%) Plant
[PO:0020124] root stele
MSI_000019905 Unavailable 377.0624 377.0624 ~ 377.0624
MzDiff: none
5-Carboxyfluorescein (BioDeep_00000174677)
Formula: C21H12O7 (376.0583)
-0.49 (100%) Plant
[PO:0025197] stele
MSI_000037584 Unreliable 377.063 377.063 ~ 377.063
MzDiff: none
8-{9-hydroxy-7-oxofuro[3,2-g]chromen-4-yl}-7-methoxychromen-2-one (BioDeep_00002317202)
Formula: C21H12O7 (376.0583)
0.81 (100%) Posidonia oceanica
[UBERON:0000329] hair root

Found 9 Sample Hits
Metabolite Species Sample
Sinigrin

Formula: C10H17NO9S2 (359.0345)
Adducts: [M+NH4]+ (Ppm: 2.1)
Vitis vinifera (Fruit)
grape_dhb_91_1
Resolution: 50μm, 120x114

Description

Grape berries fruit, condition: Ripe

Sinigrin

Formula: C10H17NO9S2 (359.0345)
Adducts: [M+NH4]+ (Ppm: 1.6)
Vitis vinifera (Fruit)
grape_dhb_164_1
Resolution: 17μm, 136x122

Description

Grape berries fruit, condition: Late

Sinigrin

Formula: C10H17NO9S2 (359.0345)
Adducts: [M+NH4]+ (Ppm: 2.1)
Vitis vinifera (Fruit)
grape_dhb_163_1
Resolution: 17μm, 132x115

Description

Grape berries fruit, condition: Late

5-Carboxyfluorescein

Formula: C21H12O7 (376.0583)
Adducts: [M+H]+ (Ppm: 9.2)
Mus musculus (Lung)
image3
Resolution: 40μm, 146x190

Description

Fig. 4 MALDI-MSI data of mouse lung tissue after administration with D9-choline and U13C-DPPC–containing Poractant alfa surfactant (labels administered 12 h prior to tissue collection). Ion images of (A) m/z 796.6856 ([U13C-DPPC+Na]+), (B) m/z 756.5154 [PC32:0+Na]+), and (C) m/z 765.6079 ([D9-PC32:0+Na]+). D: Overlay image of [U13C-PC32:0+Na]+ (red) and [D9-PC32:0+Na]+ (green). Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

5-Carboxyfluorescein

Formula: C21H12O7 (376.0583)
Adducts: [M+H]+ (Ppm: 8.2)
Mus musculus (Lung)
image4
Resolution: 40μm, 162x156

Description

Fig 6c Fig. 6 MALDI-MSI of U13C-PC16:0/16:0 acyl chain remodeling. A: Averaged MALDI mass spectrum from lung tissue collected from mice euthanized 12 h after administration of D9-choline and U13C-DPPC–containing Poractant alfa surfactant. The ion at m/z 828.6321 is assigned as the [M+Na]+ ion of 13C24-PC16:0_20:4 formed by acyl remodeling of U13C-PC16:0/16:0. The “NL” value refers to the intensity of the base peak in the full range MS1 spectrum. B: MS/MS spectrum of precursor ions at m/z 828.5 ± 0.5 with fragment ions originating from [13C24-PC16:0_20:4+Na]+ annotated. Part-per-million (ppm) mass errors are provided in parentheses. C, D: MALDI-MSI data of [U13C-DPPC+Na]+ (blue), [PC36:4+Na]+ (green) and [13C24-PC16:0_20:4+Na]+ (red) in lung tissue collected from mice (C) 12 h and (D) 18 h after label administration. All images were visualized using total-ion-current normalization and hotspot removal (high quantile = 99%). MS/MS, tandem mass spectrometry; MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

5-Carboxyfluorescein

Formula: C21H12O7 (376.0583)
Adducts: [M+H]+ (Ppm: 8.2)
Mus musculus (Lung)
image5
Resolution: 40μm, 163x183

Description

Supplementary Figure S8. MALDI-MSI data of mouse lung tissue administered with D9-choline and U 13C-DPPC–containing Poractant alfa surfactant (labels administered 18 h prior to sacrifice). Ion images of (a) m/z 796.6856 ([U13C-DPPC+Na]+), (b) m/z 756.5154 [PC32:0+Na]+ and (c) m/z 765.6079 ([D9-PC32:0+Na]+). (d) Overlay image of [U13C-DPPC+Na]+ (red) and [D9-PC32:0+Na]+ (green). Parts per million (ppm) mass errors are indicated in parentheses. All images were visualised using totalion-current normalisation and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0.

Sinigrin

Formula: C10H17NO9S2 (359.0345)
Adducts: [M+NH4]+ (Ppm: 14.6)
Posidonia oceanica (root)
20190613_MS1_A19r-18
Resolution: 17μm, 246x264

Description

5-Carboxyfluorescein

Formula: C21H12O7 (376.0583)
Adducts: [M+H]+ (Ppm: 7.6)
Mytilus edulis (mantle)
20190216_MS38_Mytilus_mantle_350-1500_DHB_pos_A26_10um_275x210
Resolution: 10μm, 275x210

Description

4,7-Diphenyl-1,10-phenanthrolinesulphonic acid

Formula: C24H16N2O3S (412.0882)
Adducts: [M+H-2H2O]+ (Ppm: 9.3)
Homo sapiens (colorectal adenocarcinoma)
439TopL, 409TopR, 429BottomL, 419BottomR-profile
Resolution: 17μm, 157x136

Description

The human colorectal adenocarcinoma sample was excised during a surgical operation performed at the Imperial College Healthcare NHS Trust. The sample and procedures were carried out in accordance with ethical approval (14/EE/0024).