在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 7 Reference Ions Near m/z 368.9883
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000015775 Unreliable 368.9785 368.9784 ~ 368.9786
MzDiff: 0.7 ppm
Tioconazole (BioDeep_00000003488)
Formula: C16H13Cl3N2OS (385.9814)
3.44 (100%) Vitis vinifera
[PO:0009085] exocarp
MSI_000054406 Unreliable 368.9973 368.9973 ~ 368.9973
MzDiff: none
methyl 5,7-dichloro-3,8-dihydroxy-6-methyl-9-oxoxanthene-1-carboxylate (BioDeep_00002231476)
Formula: C16H10Cl2O6 (367.9854)
2.54 (100%) MALDI - CHCA
[NOVOCELL:BACKGROUND] blank
MSI_000055323 Unreliable 368.9884 368.9884 ~ 368.9884
MzDiff: none
Uridine 5'-diphosphate (BioDeep_00000002945)
Formula: C9H14N2O12P2 (404.0022)
1.47 (100%) MALDI - DHB
[NOVOCELL:BACKGROUND] blank
MSI_000004404 Unreliable 368.9891 368.9891 ~ 368.9891
MzDiff: none
Uridine 5'-diphosphate (BioDeep_00000002945)
Formula: C9H14N2O12P2 (404.0022)
0.66 (100%) Homo sapiens
[UBERON:0002107] liver
MSI_000040657 Unreliable 368.9862 368.9862 ~ 368.9862
MzDiff: none
Uridine 5'-diphosphate (BioDeep_00000002945)
Formula: C9H14N2O12P2 (404.0022)
2.27 (100%) Posidonia oceanica
[PO:0006036] root epidermis
MSI_000040771 Unreliable 368.9981 368.9981 ~ 368.9981
MzDiff: none
methyl 5,7-dichloro-3,8-dihydroxy-6-methyl-9-oxoxanthene-1-carboxylate (BioDeep_00002231476)
Formula: C16H10Cl2O6 (367.9854)
2.15 (100%) Posidonia oceanica
[PO:0006036] root epidermis
MSI_000065937 Unreliable 368.9844 368.9844 ~ 368.9844
MzDiff: none
Uridine 5'-diphosphate (BioDeep_00000002945)
Formula: C9H14N2O12P2 (404.0022)
1.07 (100%) Homo sapiens
[UBERON:0007779] transudate

Found 10 Sample Hits
Metabolite Species Sample
Uridine 5'-diphosphate

Formula: C9H14N2O12P2 (404.0022)
Adducts: [M+H-2H2O]+ (Ppm: 2)
Homo sapiens (Liver)
20171107_FIT4_DHBpos_p70_s50
Resolution: 50μm, 70x70

Description

methyl 5,7-dichloro-3,8-dihydroxy-6-methyl-9-oxoxanthene-1-carboxylate

Formula: C16H10Cl2O6 (367.9854)
Adducts: [M+H]+ (Ppm: 15.1)
Vitis vinifera (Fruit)
grape_dhb_163_1
Resolution: 17μm, 132x115

Description

Grape berries fruit, condition: Late

Uridine 5'-diphosphate

Formula: C9H14N2O12P2 (404.0022)
Adducts: [M+H-2H2O]+ (Ppm: 0.1)
Mus musculus (Lung)
image3
Resolution: 40μm, 146x190

Description

Fig. 4 MALDI-MSI data of mouse lung tissue after administration with D9-choline and U13C-DPPC–containing Poractant alfa surfactant (labels administered 12 h prior to tissue collection). Ion images of (A) m/z 796.6856 ([U13C-DPPC+Na]+), (B) m/z 756.5154 [PC32:0+Na]+), and (C) m/z 765.6079 ([D9-PC32:0+Na]+). D: Overlay image of [U13C-PC32:0+Na]+ (red) and [D9-PC32:0+Na]+ (green). Part-per-million (ppm) mass errors are indicated in parentheses. All images were visualized using total-ion-current normalization and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0. MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

Uridine 5'-diphosphate

Formula: C9H14N2O12P2 (404.0022)
Adducts: [M+H-2H2O]+ (Ppm: 0.1)
Mus musculus (Lung)
image4
Resolution: 40μm, 162x156

Description

Fig 6c Fig. 6 MALDI-MSI of U13C-PC16:0/16:0 acyl chain remodeling. A: Averaged MALDI mass spectrum from lung tissue collected from mice euthanized 12 h after administration of D9-choline and U13C-DPPC–containing Poractant alfa surfactant. The ion at m/z 828.6321 is assigned as the [M+Na]+ ion of 13C24-PC16:0_20:4 formed by acyl remodeling of U13C-PC16:0/16:0. The “NL” value refers to the intensity of the base peak in the full range MS1 spectrum. B: MS/MS spectrum of precursor ions at m/z 828.5 ± 0.5 with fragment ions originating from [13C24-PC16:0_20:4+Na]+ annotated. Part-per-million (ppm) mass errors are provided in parentheses. C, D: MALDI-MSI data of [U13C-DPPC+Na]+ (blue), [PC36:4+Na]+ (green) and [13C24-PC16:0_20:4+Na]+ (red) in lung tissue collected from mice (C) 12 h and (D) 18 h after label administration. All images were visualized using total-ion-current normalization and hotspot removal (high quantile = 99%). MS/MS, tandem mass spectrometry; MSI, mass spectrometry imaging; PC, phosphatidylcholine; U13C-DPPC, universally 13C-labeled dipalmitoyl PC.

Uridine 5'-diphosphate

Formula: C9H14N2O12P2 (404.0022)
Adducts: [M+H-2H2O]+ (Ppm: 1.8)
Mus musculus (Lung)
image5
Resolution: 40μm, 163x183

Description

Supplementary Figure S8. MALDI-MSI data of mouse lung tissue administered with D9-choline and U 13C-DPPC–containing Poractant alfa surfactant (labels administered 18 h prior to sacrifice). Ion images of (a) m/z 796.6856 ([U13C-DPPC+Na]+), (b) m/z 756.5154 [PC32:0+Na]+ and (c) m/z 765.6079 ([D9-PC32:0+Na]+). (d) Overlay image of [U13C-DPPC+Na]+ (red) and [D9-PC32:0+Na]+ (green). Parts per million (ppm) mass errors are indicated in parentheses. All images were visualised using totalion-current normalisation and using hotspot removal (high quantile = 99%). DPPC = PC16:0/16:0.

methyl 5,7-dichloro-3,8-dihydroxy-6-methyl-9-oxoxanthene-1-carboxylate

Formula: C16H10Cl2O6 (367.9854)
Adducts: [M+H]+ (Ppm: 12.4)
Posidonia oceanica (root)
20190614_MS1_A19r-20
Resolution: 17μm, 262x276

Description

Seagrasses are one of the most efficient natural sinks of carbon dioxide (CO2) on Earth. Despite covering less than 0.1% of coastal regions, they have the capacity to bury up to 10% of marine organic matter and can bury the same amount of carbon 35 times faster than tropical rainforests. On land, the soil’s ability to sequestrate carbon is intimately linked to microbial metabolism. Despite the growing attention to the link between plant production, microbial communities, and the carbon cycle in terrestrial ecosystems, these processes remain enigmatic in the sea. Here, we show that seagrasses excrete organic sugars, namely in the form of sucrose, into their rhizospheres. Surprisingly, the microbial communities living underneath meadows do not fully use this sugar stock in their metabolism. Instead, sucrose piles up in the sediments to mM concentrations underneath multiple types of seagrass meadows. Sediment incubation experiments show that microbial communities living underneath a meadow use sucrose at low metabolic rates. Our metagenomic analyses revealed that the distinct community of microorganisms occurring underneath meadows is limited in their ability to degrade simple sugars, which allows these compounds to persist in the environment over relatively long periods of time. Our findings reveal how seagrasses form blue carbon stocks despite the relatively small area they occupy. Unfortunately, anthropogenic disturbances are threatening the long-term persistence of seagrass meadows. Given that these sediments contain a large stock of sugars that heterotopic bacteria can degrade, it is even more important to protect these ecosystems from degradation.

Uridine 5'-diphosphate

Formula: C9H14N2O12P2 (404.0022)
Adducts: [M+H-2H2O]+ (Ppm: 5.8)
Posidonia oceanica (root)
MS1_20180404_PO_1200
Resolution: 17μm, 193x208

Description

Uridine 5'-diphosphate

Formula: C9H14N2O12P2 (404.0022)
Adducts: [M+H-2H2O]+ (Ppm: 9.9)
Homo sapiens (esophagus)
LNTO30_7_2
Resolution: 75μm, 82x68

Description

Uridine 5'-diphosphate

Formula: C9H14N2O12P2 (404.0022)
Adducts: [M+H-2H2O]+ (Ppm: 10.7)
Homo sapiens (colorectal adenocarcinoma)
240TopL, 210TopR, 230BottomL, 220BottomR-centroid
Resolution: 50μm, 142x141

Description

Uridine 5'-diphosphate

Formula: C9H14N2O12P2 (404.0022)
Adducts: [M+H-2H2O]+ (Ppm: 10.1)
Homo sapiens (colorectal adenocarcinoma)
120TopL, 90TopR, 110BottomL, 100BottomR-centroid
Resolution: 50μm, 132x136

Description