在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 9 Reference Ions Near m/z 313.0856
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000054423 Reliable 313.0856 313.0854 ~ 313.0859
MzDiff: 2.3 ppm
(4s,5s)-5-[(3s,4r)-4-chloro-3-hydroxy-2-methyl-5-oxocyclopent-1-en-1-yl]-3-methylidene-4-(3-oxobutyl)oxolan-2-one (BioDeep_00002129153)
Formula: C15H17ClO5 (312.0764)
2.48 (88%) MALDI - CHCA
[NOVOCELL:BACKGROUND] blank
MSI_000001070 Unavailable 313.0932 313.0932 ~ 313.0932
MzDiff: none
Quinacridone (BioDeep_00000034622)
Formula: C20H12N2O2 (312.0899)
-0.37 (100%) Mus musculus
[UBERON:0001224] renal pelvis
MSI_000001533 Unavailable 313.0932 313.0932 ~ 313.0932
MzDiff: none
Quinacridone (BioDeep_00000034622)
Formula: C20H12N2O2 (312.0899)
-0.37 (100%) Mus musculus
[UBERON:0001225] cortex of kidney
MSI_000002002 Unavailable 313.0932 313.0932 ~ 313.0932
MzDiff: none
Quinacridone (BioDeep_00000034622)
Formula: C20H12N2O2 (312.0899)
-0.37 (100%) Mus musculus
[UBERON:0001293] outer medulla of kidney
MSI_000033153 Unreliable 313.0854 313.0854 ~ 313.0854
MzDiff: none
(4s,5s)-5-[(3s,4r)-4-chloro-3-hydroxy-2-methyl-5-oxocyclopent-1-en-1-yl]-3-methylidene-4-(3-oxobutyl)oxolan-2-one (BioDeep_00002129153)
Formula: C15H17ClO5 (312.0764)
2.27 (100%) Posidonia oceanica
[PO:0005352] xylem
MSI_000035721 Unavailable 313.0854 313.0854 ~ 313.0854
MzDiff: none
(4s,5s)-5-[(3s,4r)-4-chloro-3-hydroxy-2-methyl-5-oxocyclopent-1-en-1-yl]-3-methylidene-4-(3-oxobutyl)oxolan-2-one (BioDeep_00002129153)
Formula: C15H17ClO5 (312.0764)
-0.31 (100%) Posidonia oceanica
[PO:0006203] pericycle
MSI_000038372 Unreliable 313.0799 313.0799 ~ 313.0799
MzDiff: none
2-[(2-carboxy-1-hydroxyethylidene)amino]-3-(1h-indol-3-yl)propanoic acid (BioDeep_00002058410)
Formula: C14H14N2O5 (290.0903)
2.25 (100%) Posidonia oceanica
[PO:0005059] root endodermis
MSI_000039661 Unreliable 313.0917 313.0917 ~ 313.0917
MzDiff: none
Vanilloyl glucose (BioDeep_00000004044)
Formula: C14H18O9 (330.0951)
2.08 (100%) Posidonia oceanica
[PO:0005417] phloem
MSI_000040612 Unavailable 313.0858 313.0858 ~ 313.0858
MzDiff: none
(4s,5s)-5-[(3s,4r)-4-chloro-3-hydroxy-2-methyl-5-oxocyclopent-1-en-1-yl]-3-methylidene-4-(3-oxobutyl)oxolan-2-one (BioDeep_00002129153)
Formula: C15H17ClO5 (312.0764)
-0.27 (100%) Posidonia oceanica
[PO:0005417] phloem

Found 3 Sample Hits
Metabolite Species Sample
(4s,5s)-5-[(3s,4r)-4-chloro-3-hydroxy-2-methyl-5-oxocyclopent-1-en-1-yl]-3-methylidene-4-(3-oxobutyl)oxolan-2-one

Formula: C15H17ClO5 (312.0764)
Adducts: [M+H]+ (Ppm: 5.4)
Posidonia oceanica (root)
20190614_MS1_A19r-20
Resolution: 17μm, 262x276

Description

Seagrasses are one of the most efficient natural sinks of carbon dioxide (CO2) on Earth. Despite covering less than 0.1% of coastal regions, they have the capacity to bury up to 10% of marine organic matter and can bury the same amount of carbon 35 times faster than tropical rainforests. On land, the soil’s ability to sequestrate carbon is intimately linked to microbial metabolism. Despite the growing attention to the link between plant production, microbial communities, and the carbon cycle in terrestrial ecosystems, these processes remain enigmatic in the sea. Here, we show that seagrasses excrete organic sugars, namely in the form of sucrose, into their rhizospheres. Surprisingly, the microbial communities living underneath meadows do not fully use this sugar stock in their metabolism. Instead, sucrose piles up in the sediments to mM concentrations underneath multiple types of seagrass meadows. Sediment incubation experiments show that microbial communities living underneath a meadow use sucrose at low metabolic rates. Our metagenomic analyses revealed that the distinct community of microorganisms occurring underneath meadows is limited in their ability to degrade simple sugars, which allows these compounds to persist in the environment over relatively long periods of time. Our findings reveal how seagrasses form blue carbon stocks despite the relatively small area they occupy. Unfortunately, anthropogenic disturbances are threatening the long-term persistence of seagrass meadows. Given that these sediments contain a large stock of sugars that heterotopic bacteria can degrade, it is even more important to protect these ecosystems from degradation.

Vanilloyl glucose

Formula: C14H18O9 (330.0951)
Adducts: [M+H-H2O]+ (Ppm: 18.8)
Posidonia oceanica (root)
20190613_MS1_A19r-18
Resolution: 17μm, 246x264

Description

(4s,5s)-5-[(3s,4r)-4-chloro-3-hydroxy-2-methyl-5-oxocyclopent-1-en-1-yl]-3-methylidene-4-(3-oxobutyl)oxolan-2-one

Formula: C15H17ClO5 (312.0764)
Adducts: [M+H]+ (Ppm: 6.6)
Posidonia oceanica (root)
MS1_20180404_PO_1200
Resolution: 17μm, 193x208

Description