在BioDeep NovoCell知识数据库中,参考离子总共被划分为4个级别。
  • Confirmed: 这个参考离子已经通过手动审计得到确认和验证。
  • Reliable: 这个参考离子可能在特定的解剖组织环境中高度保守。
  • Unreliable: 这个参考离子具有较高的排名价值,但缺乏可重复性。
  • Unavailable: 由于排名价值低且缺乏可重复性,这个参考离子不应用于注释。

Found 4 Reference Ions Near m/z 178.9503
NovoCell ID m/z Mass Window Metabolite Ranking Anatomy Context
MSI_000007251 Reliable 178.9505 178.9503 ~ 178.9508
MzDiff: 2.3 ppm
Pyrophosphate (BioDeep_00000004365)
Formula: H4O7P2 (177.9432)
3 (100%) Rattus norvegicus
[UBERON:0004359] corpus epididymis
MSI_000034361 Unreliable 178.9506 178.9505 ~ 178.9508
MzDiff: 1.6 ppm
3-Bromo-4-methoxybenzaldehyde (BioDeep_00000679693)
Formula: C8H7BrO2 (213.9629)
3.66 (100%) Posidonia oceanica
[PO:0006036] root epidermis
MSI_000039121 Unreliable 178.9507 178.9507 ~ 178.9508
MzDiff: 0.7 ppm
3-Bromo-4-methoxybenzaldehyde (BioDeep_00000679693)
Formula: C8H7BrO2 (213.9629)
1.01 (100%) Posidonia oceanica
[PO:0005059] root endodermis
MSI_000032848 Unreliable 178.9505 178.9505 ~ 178.9505
MzDiff: none
3-Bromo-4-methoxybenzaldehyde (BioDeep_00000679693)
Formula: C8H7BrO2 (213.9629)
0.11 (100%) Posidonia oceanica
[PO:0005020] vascular bundle

Found 14 Sample Hits
Metabolite Species Sample
Pyrophosphate

Formula: H4O7P2 (177.9432)
Adducts: [M+H]+ (Ppm: 1.2)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito03_17
Resolution: 17μm, 208x108

Description

1 male adult wild-type rat was obtained from Inserm U1085 - Irset Research Institute (University of Rennes1, France). Animals were age 60 days and were reared under ad-lib conditions. Care and handling of all animals complied with EU directive 2010/63/EU on the protection of animals used for scientific purposes. The whole epididymis was excised from each animal immediately post-mortem, loosely wrapped rapidly in an aluminum foil and a 2.5% (w/v) carboxymethylcellulose (CMC) solution was poured to embed the epididymis to preserve their morphology. To remove air bubbles, the filled aluminum molds was gently freezed by depositing it on isopentane or dry ice, then on the nitrogen vapors and finally by progressively dipping the CMC/sample coated with aluminum foil into liquid nitrogen (or only flush with liquid nitrogen). Frozen tissues were stored at -80 °C until use to avoid degradation.

Pyrophosphate

Formula: H4O7P2 (177.9432)
Adducts: [M+H]+ (Ppm: 1.2)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito03_18
Resolution: 17μm, 208x104

Description

Pyrophosphate

Formula: H4O7P2 (177.9432)
Adducts: [M+H]+ (Ppm: 1.2)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_43
Resolution: 17μm, 298x106

Description

Pyrophosphate

Formula: H4O7P2 (177.9432)
Adducts: [M+H]+ (Ppm: 0)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_44
Resolution: 17μm, 299x111

Description

Pyrophosphate

Formula: H4O7P2 (177.9432)
Adducts: [M+H]+ (Ppm: 0.5)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_46
Resolution: 17μm, 298x106

Description

Pyrophosphate

Formula: H4O7P2 (177.9432)
Adducts: [M+H]+ (Ppm: 1.6)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito08_48
Resolution: 17μm, 294x107

Description

Pyrophosphate

Formula: H4O7P2 (177.9432)
Adducts: [M+H]+ (Ppm: 0.5)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_04
Resolution: 17μm, 178x91

Description

Pyrophosphate

Formula: H4O7P2 (177.9432)
Adducts: [M+H]+ (Ppm: 0.5)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_03
Resolution: 17μm, 159x110

Description

Pyrophosphate

Formula: H4O7P2 (177.9432)
Adducts: [M+H]+ (Ppm: 0)
Rattus norvegicus (normal)
epik_dhb_head_ito01_05
Resolution: 17μm, 183x105

Description

Pyrophosphate

Formula: H4O7P2 (177.9432)
Adducts: [M+H]+ (Ppm: 0.6)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito01_06
Resolution: 17μm, 183x103

Description

Pyrophosphate

Formula: H4O7P2 (177.9432)
Adducts: [M+H]+ (Ppm: 0)
Rattus norvegicus (Epididymis)
epik_dhb_head_ito03_14
Resolution: 17μm, 205x103

Description

3-Bromo-4-methoxybenzaldehyde

Formula: C8H7BrO2 (213.9629)
Adducts: [M+H-2H2O]+ (Ppm: 7.9)
Posidonia oceanica (root)
20190614_MS1_A19r-20
Resolution: 17μm, 262x276

Description

Seagrasses are one of the most efficient natural sinks of carbon dioxide (CO2) on Earth. Despite covering less than 0.1% of coastal regions, they have the capacity to bury up to 10% of marine organic matter and can bury the same amount of carbon 35 times faster than tropical rainforests. On land, the soil’s ability to sequestrate carbon is intimately linked to microbial metabolism. Despite the growing attention to the link between plant production, microbial communities, and the carbon cycle in terrestrial ecosystems, these processes remain enigmatic in the sea. Here, we show that seagrasses excrete organic sugars, namely in the form of sucrose, into their rhizospheres. Surprisingly, the microbial communities living underneath meadows do not fully use this sugar stock in their metabolism. Instead, sucrose piles up in the sediments to mM concentrations underneath multiple types of seagrass meadows. Sediment incubation experiments show that microbial communities living underneath a meadow use sucrose at low metabolic rates. Our metagenomic analyses revealed that the distinct community of microorganisms occurring underneath meadows is limited in their ability to degrade simple sugars, which allows these compounds to persist in the environment over relatively long periods of time. Our findings reveal how seagrasses form blue carbon stocks despite the relatively small area they occupy. Unfortunately, anthropogenic disturbances are threatening the long-term persistence of seagrass meadows. Given that these sediments contain a large stock of sugars that heterotopic bacteria can degrade, it is even more important to protect these ecosystems from degradation.

3-Bromo-4-methoxybenzaldehyde

Formula: C8H7BrO2 (213.9629)
Adducts: [M+H-2H2O]+ (Ppm: 9.6)
Posidonia oceanica (root)
20190613_MS1_A19r-18
Resolution: 17μm, 246x264

Description

3-Bromo-4-methoxybenzaldehyde

Formula: C8H7BrO2 (213.9629)
Adducts: [M+H-2H2O]+ (Ppm: 9)
Posidonia oceanica (root)
MS1_20180404_PO_1200
Resolution: 17μm, 193x208

Description